Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3170

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
3,552,445	-				+0.5
3,552,624	+		Pf1N1B4_3169	0.12	-0.3
3,552,836	+		Pf1N1B4_3169	0.71	-1.4
3,552,837	-		Pf1N1B4_3169	0.72	-1.0
3,552,878	+		Pf1N1B4_3169	0.83	+0.2
3,552,878	+		Pf1N1B4_3169	0.83	+1.2
3,552,878	+		Pf1N1B4_3169	0.83	+1.2
3,552,879	-		Pf1N1B4_3169	0.84	+0.4
3,552,879	-		Pf1N1B4_3169	0.84	-1.3
3,552,879	-		Pf1N1B4_3169	0.84	-2.1
3,552,976	+				-2.4
3,552,981	+				-1.4
3,552,982	-				+0.2
3,552,982	-				+1.0
3,553,041	+				+0.5
3,553,042	-				+0.2
3,553,042	-				-2.6
3,553,103	+				-0.1
3,553,104	-				-0.8
3,553,104	-				-3.0
3,553,104	-				-1.8
3,553,213	+		Pf1N1B4_3170	0.11	-1.1
3,553,214	-		Pf1N1B4_3170	0.11	-0.4
3,553,329	+		Pf1N1B4_3170	0.22	-1.4
3,553,329	+		Pf1N1B4_3170	0.22	-0.8
3,553,329	+		Pf1N1B4_3170	0.22	-0.2
3,553,329	+		Pf1N1B4_3170	0.22	+0.1
3,553,329	+		Pf1N1B4_3170	0.22	-0.8
3,553,329	+		Pf1N1B4_3170	0.22	-0.8
3,553,330	-		Pf1N1B4_3170	0.22	-1.8
3,553,330	-		Pf1N1B4_3170	0.22	-1.8
3,553,330	-		Pf1N1B4_3170	0.22	+2.4
3,553,330	-		Pf1N1B4_3170	0.22	-1.5
3,553,330	-		Pf1N1B4_3170	0.22	-0.9
3,553,330	-		Pf1N1B4_3170	0.22	-0.8
3,553,330	-		Pf1N1B4_3170	0.22	-0.4
3,553,468	+		Pf1N1B4_3170	0.36	-0.5
3,553,468	+		Pf1N1B4_3170	0.36	+0.2
3,553,469	-		Pf1N1B4_3170	0.36	-1.2
3,553,530	+		Pf1N1B4_3170	0.42	-0.8
3,553,530	+		Pf1N1B4_3170	0.42	+0.2
3,553,530	+		Pf1N1B4_3170	0.42	-1.8
3,553,530	+		Pf1N1B4_3170	0.42	-1.5
3,553,530	+		Pf1N1B4_3170	0.42	+1.8
3,553,531	-		Pf1N1B4_3170	0.42	-0.4
3,553,531	-		Pf1N1B4_3170	0.42	+2.0
3,553,531	-		Pf1N1B4_3170	0.42	+0.4
3,553,593	+		Pf1N1B4_3170	0.49	-0.8
3,553,593	+		Pf1N1B4_3170	0.49	-1.4
3,553,593	+		Pf1N1B4_3170	0.49	-1.3
3,553,593	+		Pf1N1B4_3170	0.49	+0.6
3,553,593	+		Pf1N1B4_3170	0.49	-1.8
3,553,594	-		Pf1N1B4_3170	0.49	+3.7
3,553,594	-		Pf1N1B4_3170	0.49	-2.8
3,553,594	-		Pf1N1B4_3170	0.49	-1.4
3,553,618	+		Pf1N1B4_3170	0.51	-0.2
3,553,618	+		Pf1N1B4_3170	0.51	+0.2
3,553,618	+		Pf1N1B4_3170	0.51	-0.4
3,553,618	+		Pf1N1B4_3170	0.51	+0.2
3,553,618	+		Pf1N1B4_3170	0.51	-1.8
3,553,618	+		Pf1N1B4_3170	0.51	-1.4
3,553,619	-		Pf1N1B4_3170	0.51	-1.4
3,553,619	-		Pf1N1B4_3170	0.51	-0.4
3,553,619	-				-0.8
3,553,619	-		Pf1N1B4_3170	0.51	-2.4
3,553,619	-		Pf1N1B4_3170	0.51	-2.4
3,553,619	-		Pf1N1B4_3170	0.51	-0.8
3,553,701	+		Pf1N1B4_3170	0.59	-1.4
3,553,701	+		Pf1N1B4_3170	0.59	-1.0
3,553,824	+		Pf1N1B4_3170	0.71	-0.8
3,553,824	+		Pf1N1B4_3170	0.71	-1.4
3,553,824	+		Pf1N1B4_3170	0.71	-1.8
3,553,825	-		Pf1N1B4_3170	0.72	-1.4
3,553,857	+		Pf1N1B4_3170	0.75	-1.1
3,553,857	+		Pf1N1B4_3170	0.75	-1.4
3,553,857	+		Pf1N1B4_3170	0.75	-0.8
3,553,857	+		Pf1N1B4_3170	0.75	-2.0
3,553,881	+		Pf1N1B4_3170	0.77	+0.2
3,553,881	+		Pf1N1B4_3170	0.77	-0.8
3,553,882	-		Pf1N1B4_3170	0.77	-1.4
3,553,882	-		Pf1N1B4_3170	0.77	-2.1
3,553,882	-				-0.8
3,553,882	-		Pf1N1B4_3170	0.77	+1.2
3,553,954	+		Pf1N1B4_3170	0.84	-1.4
3,554,043	-				-1.8
3,554,158	+				+0.4
3,554,169	+				-0.8
3,554,169	+				+0.2
3,554,169	+				+0.6
3,554,169	+				+1.2
3,554,169	+				-0.5
3,554,169	+				+0.1
3,554,170	-				+0.2
3,554,170	-				-1.1
3,554,170	-				-1.4
3,554,170	-				+0.2
3,554,179	+				-0.8
3,554,179	+				-2.1
3,554,179	+				+0.9
3,554,180	-				-0.8
3,554,180	-				+1.2
3,554,272	-				-2.6
3,554,275	-				+1.1
3,554,284	-				-1.4
3,554,284	-				-1.8
3,554,291	-				-0.8
3,554,291	-				-0.2
3,554,291	-				+2.5
3,554,295	-				-1.4
3,554,504	-				+0.2
3,554,504	-				-0.8
3,554,504	-				-0.8
3,554,504	-				-1.2
3,554,504	-				-0.1
3,554,504	-				-0.1
3,554,522	-				-1.5
3,554,522	-				-2.6
3,554,522	-				+1.2
3,554,583	-				-1.8
3,554,583	-				+0.6
3,554,607	+				+0.8
3,554,608	-				-0.8
3,554,608	-				-1.8
3,554,608	-				-1.8
3,554,615	-				-0.1
3,554,656	-				-2.4
3,555,020	+		Pf1N1B4_3172	0.29	-0.4