Experiment: Chlorite 0.1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc03196 and SMc03197 are separated by 169 nucleotides SMc03197 and SMc03198 overlap by 4 nucleotides
SMc03196: SMc03196 - molybdate ABC transporter substrate-binding protein, at 3,159,930 to 3,160,715
SMc03196
SMc03197: SMc03197 - molybdate ABC transporter permease, at 3,160,885 to 3,161,586
SMc03197
SMc03198: SMc03198 - molybdenum ABC transporter ATP-binding protein, at 3,161,583 to 3,162,656
SMc03198
Position (kb)
3160
3161
3162 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 3159.892 kb on + strand at 3159.893 kb on - strand at 3159.906 kb on + strand at 3159.961 kb on + strand at 3160.207 kb on - strand, within SMc03196 at 3160.392 kb on + strand, within SMc03196 at 3160.392 kb on + strand, within SMc03196 at 3160.392 kb on + strand, within SMc03196 at 3160.393 kb on - strand, within SMc03196 at 3160.393 kb on - strand, within SMc03196 at 3160.596 kb on + strand, within SMc03196 at 3160.596 kb on + strand, within SMc03196 at 3160.596 kb on + strand, within SMc03196 at 3160.597 kb on - strand, within SMc03196 at 3160.878 kb on + strand at 3160.879 kb on - strand at 3160.997 kb on + strand, within SMc03197 at 3160.997 kb on + strand, within SMc03197 at 3160.998 kb on - strand, within SMc03197 at 3160.998 kb on - strand, within SMc03197 at 3160.998 kb on - strand, within SMc03197 at 3161.049 kb on + strand, within SMc03197 at 3161.050 kb on - strand, within SMc03197 at 3161.050 kb on - strand, within SMc03197 at 3161.072 kb on + strand, within SMc03197 at 3161.449 kb on + strand, within SMc03197 at 3161.449 kb on + strand, within SMc03197 at 3161.449 kb on + strand, within SMc03197 at 3161.449 kb on + strand, within SMc03197 at 3161.450 kb on - strand, within SMc03197 at 3161.450 kb on - strand, within SMc03197 at 3161.450 kb on - strand, within SMc03197 at 3161.451 kb on + strand, within SMc03197 at 3161.820 kb on + strand, within SMc03198 at 3161.877 kb on + strand, within SMc03198 at 3161.878 kb on - strand, within SMc03198 at 3161.878 kb on - strand, within SMc03198 at 3162.102 kb on + strand, within SMc03198 at 3162.103 kb on - strand, within SMc03198 at 3162.144 kb on + strand, within SMc03198 at 3162.144 kb on + strand, within SMc03198 at 3162.144 kb on + strand at 3162.144 kb on + strand, within SMc03198 at 3162.145 kb on - strand, within SMc03198 at 3162.145 kb on - strand, within SMc03198 at 3162.347 kb on - strand, within SMc03198 at 3162.414 kb on + strand, within SMc03198 at 3162.414 kb on + strand, within SMc03198 at 3162.539 kb on - strand, within SMc03198 at 3162.539 kb on - strand, within SMc03198
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.1 mM remove 3,159,892 + -0.1 3,159,893 - +0.1 3,159,906 + +0.7 3,159,961 + -4.1 3,160,207 - SMc03196 0.35 -2.0 3,160,392 + SMc03196 0.59 -3.2 3,160,392 + SMc03196 0.59 -2.2 3,160,392 + SMc03196 0.59 -4.3 3,160,393 - SMc03196 0.59 +1.4 3,160,393 - SMc03196 0.59 -1.7 3,160,596 + SMc03196 0.85 +3.5 3,160,596 + SMc03196 0.85 -3.3 3,160,596 + SMc03196 0.85 -2.7 3,160,597 - SMc03196 0.85 +0.7 3,160,878 + -4.5 3,160,879 - -3.4 3,160,997 + SMc03197 0.16 -1.1 3,160,997 + SMc03197 0.16 -3.1 3,160,998 - SMc03197 0.16 -3.2 3,160,998 - SMc03197 0.16 -4.1 3,160,998 - SMc03197 0.16 -1.9 3,161,049 + SMc03197 0.23 -1.5 3,161,050 - SMc03197 0.24 -3.9 3,161,050 - SMc03197 0.24 -3.7 3,161,072 + SMc03197 0.27 -3.6 3,161,449 + SMc03197 0.80 -1.1 3,161,449 + SMc03197 0.80 -1.2 3,161,449 + SMc03197 0.80 -1.5 3,161,449 + SMc03197 0.80 -3.2 3,161,450 - SMc03197 0.80 -2.7 3,161,450 - SMc03197 0.80 -2.5 3,161,450 - SMc03197 0.80 +0.7 3,161,451 + SMc03197 0.81 -1.8 3,161,820 + SMc03198 0.22 -3.0 3,161,877 + SMc03198 0.27 -0.6 3,161,878 - SMc03198 0.27 -1.3 3,161,878 - SMc03198 0.27 -2.5 3,162,102 + SMc03198 0.48 +0.2 3,162,103 - SMc03198 0.48 -2.2 3,162,144 + SMc03198 0.52 -2.8 3,162,144 + SMc03198 0.52 -4.5 3,162,144 + +0.7 3,162,144 + SMc03198 0.52 -0.9 3,162,145 - SMc03198 0.52 -3.2 3,162,145 - SMc03198 0.52 -3.1 3,162,347 - SMc03198 0.71 +0.3 3,162,414 + SMc03198 0.77 +1.8 3,162,414 + SMc03198 0.77 -1.0 3,162,539 - SMc03198 0.89 -0.9 3,162,539 - SMc03198 0.89 -0.3
Or see this region's nucleotide sequence