Experiment: Chlorite 0.1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc00970 and SMc00969 are separated by 3 nucleotides SMc00969 and SMc00968 are separated by 62 nucleotides SMc00968 and SMc00967 are separated by 13 nucleotides SMc00967 and SMc00966 overlap by 13 nucleotides
SMc00970: SMc00970 - exodeoxyribonuclease VII small subunit, at 971,124 to 971,375
SMc00970
SMc00969: SMc00969 - hypothetical protein, at 971,379 to 972,308
SMc00969
SMc00968: SMc00968 - oxidoreductase, at 972,371 to 973,339
SMc00968
SMc00967: SMc00967 - hypothetical protein, at 973,353 to 973,754
SMc00967
SMc00966: SMc00966 - acetyl-COA acyltransferase, at 973,742 to 974,935
SMc00966
Position (kb) 972
973
974 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 971.380 kb on + strand at 971.380 kb on + strand at 971.380 kb on + strand at 971.381 kb on - strand at 971.402 kb on + strand at 971.440 kb on + strand at 971.496 kb on + strand, within SMc00969 at 971.497 kb on - strand, within SMc00969 at 971.497 kb on - strand, within SMc00969 at 971.740 kb on + strand, within SMc00969 at 971.748 kb on + strand, within SMc00969 at 971.748 kb on + strand, within SMc00969 at 971.749 kb on - strand, within SMc00969 at 971.889 kb on + strand at 971.890 kb on - strand, within SMc00969 at 972.058 kb on + strand, within SMc00969 at 972.058 kb on + strand, within SMc00969 at 972.058 kb on + strand, within SMc00969 at 972.059 kb on - strand, within SMc00969 at 972.059 kb on - strand, within SMc00969 at 972.059 kb on - strand, within SMc00969 at 972.059 kb on - strand, within SMc00969 at 972.062 kb on + strand, within SMc00969 at 972.062 kb on + strand, within SMc00969 at 972.063 kb on - strand, within SMc00969 at 972.320 kb on - strand at 972.320 kb on - strand at 972.320 kb on - strand at 972.584 kb on + strand, within SMc00968 at 972.585 kb on - strand, within SMc00968 at 972.642 kb on + strand, within SMc00968 at 972.975 kb on + strand, within SMc00968 at 972.975 kb on + strand, within SMc00968 at 972.975 kb on + strand, within SMc00968 at 972.976 kb on - strand, within SMc00968 at 972.976 kb on - strand, within SMc00968 at 973.183 kb on + strand, within SMc00968 at 973.184 kb on - strand, within SMc00968 at 973.185 kb on + strand, within SMc00968 at 973.186 kb on - strand, within SMc00968 at 973.236 kb on - strand, within SMc00968 at 973.406 kb on + strand, within SMc00967 at 973.408 kb on + strand, within SMc00967 at 973.408 kb on + strand, within SMc00967 at 973.408 kb on + strand, within SMc00967 at 973.409 kb on - strand, within SMc00967 at 973.409 kb on - strand, within SMc00967 at 973.409 kb on - strand, within SMc00967 at 973.409 kb on - strand, within SMc00967 at 973.409 kb on - strand, within SMc00967 at 973.425 kb on - strand, within SMc00967 at 973.440 kb on + strand, within SMc00967 at 973.440 kb on + strand, within SMc00967 at 973.441 kb on - strand, within SMc00967 at 973.443 kb on + strand, within SMc00967 at 973.443 kb on + strand, within SMc00967 at 973.444 kb on - strand, within SMc00967 at 973.578 kb on - strand, within SMc00967 at 973.705 kb on + strand, within SMc00967 at 973.893 kb on + strand, within SMc00966 at 973.894 kb on - strand, within SMc00966
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.1 mM remove 971,380 + -4.2 971,380 + -3.1 971,380 + -0.5 971,381 - -0.4 971,402 + -2.0 971,440 + +0.7 971,496 + SMc00969 0.13 -0.2 971,497 - SMc00969 0.13 +1.0 971,497 - SMc00969 0.13 +0.2 971,740 + SMc00969 0.39 +0.4 971,748 + SMc00969 0.40 -0.6 971,748 + SMc00969 0.40 +0.8 971,749 - SMc00969 0.40 +2.9 971,889 + -1.0 971,890 - SMc00969 0.55 +1.6 972,058 + SMc00969 0.73 -0.2 972,058 + SMc00969 0.73 -3.0 972,058 + SMc00969 0.73 +0.2 972,059 - SMc00969 0.73 -1.7 972,059 - SMc00969 0.73 +2.3 972,059 - SMc00969 0.73 -1.9 972,059 - SMc00969 0.73 +2.5 972,062 + SMc00969 0.73 -1.2 972,062 + SMc00969 0.73 -2.0 972,063 - SMc00969 0.74 -1.4 972,320 - -0.6 972,320 - +0.9 972,320 - -1.8 972,584 + SMc00968 0.22 +0.6 972,585 - SMc00968 0.22 -1.0 972,642 + SMc00968 0.28 -0.4 972,975 + SMc00968 0.62 +0.2 972,975 + SMc00968 0.62 -2.1 972,975 + SMc00968 0.62 -1.8 972,976 - SMc00968 0.62 -0.2 972,976 - SMc00968 0.62 -0.1 973,183 + SMc00968 0.84 -1.8 973,184 - SMc00968 0.84 +4.2 973,185 + SMc00968 0.84 +1.6 973,186 - SMc00968 0.84 -2.0 973,236 - SMc00968 0.89 -0.5 973,406 + SMc00967 0.13 -1.4 973,408 + SMc00967 0.14 -0.7 973,408 + SMc00967 0.14 -1.1 973,408 + SMc00967 0.14 -0.0 973,409 - SMc00967 0.14 -0.5 973,409 - SMc00967 0.14 -1.5 973,409 - SMc00967 0.14 -0.3 973,409 - SMc00967 0.14 +0.3 973,409 - SMc00967 0.14 -0.5 973,425 - SMc00967 0.18 -1.6 973,440 + SMc00967 0.22 +1.3 973,440 + SMc00967 0.22 -2.2 973,441 - SMc00967 0.22 -0.6 973,443 + SMc00967 0.22 -3.8 973,443 + SMc00967 0.22 +0.3 973,444 - SMc00967 0.23 +1.2 973,578 - SMc00967 0.56 -0.3 973,705 + SMc00967 0.88 -0.8 973,893 + SMc00966 0.13 -1.0 973,894 - SMc00966 0.13 -0.4
Or see this region's nucleotide sequence