Strain Fitness in Sinorhizobium meliloti 1021 around SMc00237

Experiment: Chlorite 0.1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSMc00235 and SMc00236 are separated by 9 nucleotidesSMc00236 and SMc00237 overlap by 1 nucleotidesSMc00237 and SMc00238 overlap by 1 nucleotides SMc00235: SMc00235 - anthranilate phosphoribosyltransferase, at 1,802,308 to 1,803,321 SMc00235 SMc00236: SMc00236 - Indole-3-glycerol phosphate synthase, at 1,803,331 to 1,804,146 SMc00236 SMc00237: SMc00237 - molybdenum cofactor biosynthesis protein MoaC, at 1,804,146 to 1,804,640 SMc00237 SMc00238: SMc00238 - molybdopterin biosynthesis protein, at 1,804,640 to 1,805,860 SMc00238 Position (kb) 1804 1805Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2at 1803.206 kb on + strand, within SMc00235at 1803.206 kb on + strand, within SMc00235at 1803.206 kb on + strand, within SMc00235at 1803.207 kb on - strand, within SMc00235at 1803.362 kb on - strandat 1803.363 kb on + strandat 1803.364 kb on - strandat 1803.713 kb on - strand, within SMc00236at 1803.713 kb on - strand, within SMc00236at 1804.001 kb on + strand, within SMc00236at 1804.002 kb on - strand, within SMc00236at 1804.002 kb on - strand, within SMc00236at 1804.088 kb on + strandat 1804.169 kb on + strandat 1804.170 kb on - strandat 1804.529 kb on - strand, within SMc00237at 1804.529 kb on - strand, within SMc00237at 1804.529 kb on - strand, within SMc00237at 1804.530 kb on + strand, within SMc00237at 1804.530 kb on + strand, within SMc00237at 1804.530 kb on + strand, within SMc00237at 1804.530 kb on + strand, within SMc00237at 1804.530 kb on + strand, within SMc00237at 1804.530 kb on + strand, within SMc00237at 1804.530 kb on + strand, within SMc00237at 1804.530 kb on + strand, within SMc00237at 1804.530 kb on + strand, within SMc00237at 1804.531 kb on - strand, within SMc00237at 1804.668 kb on + strandat 1804.669 kb on - strandat 1804.758 kb on + strandat 1804.759 kb on - strandat 1804.809 kb on - strand, within SMc00238at 1804.809 kb on - strand, within SMc00238

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Per-strain Table

Position Strand Gene LocusTag Fraction Chlorite 0.1 mM
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1,803,206 + SMc00235 0.89 -1.6
1,803,206 + SMc00235 0.89 +1.6
1,803,206 + SMc00235 0.89 +0.9
1,803,207 - SMc00235 0.89 -2.1
1,803,362 - -0.5
1,803,363 + -0.2
1,803,364 - +1.5
1,803,713 - SMc00236 0.47 -0.1
1,803,713 - SMc00236 0.47 -0.3
1,804,001 + SMc00236 0.82 -2.5
1,804,002 - SMc00236 0.82 -1.5
1,804,002 - SMc00236 0.82 -3.5
1,804,088 + +2.1
1,804,169 + -5.5
1,804,170 - -2.3
1,804,529 - SMc00237 0.77 -1.9
1,804,529 - SMc00237 0.77 -2.2
1,804,529 - SMc00237 0.77 -0.3
1,804,530 + SMc00237 0.78 -2.5
1,804,530 + SMc00237 0.78 -1.4
1,804,530 + SMc00237 0.78 -1.0
1,804,530 + SMc00237 0.78 -5.0
1,804,530 + SMc00237 0.78 -2.3
1,804,530 + SMc00237 0.78 -2.6
1,804,530 + SMc00237 0.78 -1.8
1,804,530 + SMc00237 0.78 -2.5
1,804,530 + SMc00237 0.78 +1.9
1,804,531 - SMc00237 0.78 -4.5
1,804,668 + -2.1
1,804,669 - -3.2
1,804,758 + +0.6
1,804,759 - -1.5
1,804,809 - SMc00238 0.14 -2.1
1,804,809 - SMc00238 0.14 +1.8

Or see this region's nucleotide sequence