Experiment: Chlorite 0.1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21381 and SM_b21382 are separated by 12 nucleotides SM_b21382 and SM_b21383 are separated by 236 nucleotides SM_b21383 and SM_b21384 are separated by 103 nucleotides
SM_b21381: SM_b21381 - hypothetical protein, at 1,045,260 to 1,045,598
_b21381
SM_b21382: SM_b21382 - hypothetical protein, at 1,045,611 to 1,046,132
_b21382
SM_b21383: SM_b21383 - SDR family dehydrogenase, at 1,046,369 to 1,047,259
_b21383
SM_b21384: SM_b21384 - SDR family dehydrogenase, at 1,047,363 to 1,048,106
_b21384
Position (kb)
1046
1047
1048 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 1045.544 kb on + strand, within SM_b21381 at 1045.545 kb on - strand, within SM_b21381 at 1045.545 kb on - strand, within SM_b21381 at 1045.628 kb on + strand at 1045.629 kb on - strand at 1045.629 kb on - strand at 1045.629 kb on - strand at 1045.629 kb on - strand at 1045.630 kb on + strand at 1045.630 kb on + strand at 1045.630 kb on + strand at 1045.630 kb on + strand at 1045.630 kb on + strand at 1045.630 kb on + strand at 1045.630 kb on + strand at 1045.631 kb on - strand at 1045.631 kb on - strand at 1045.631 kb on - strand at 1045.631 kb on - strand at 1045.631 kb on - strand at 1045.631 kb on - strand at 1045.631 kb on - strand at 1045.647 kb on - strand at 1045.774 kb on + strand, within SM_b21382 at 1045.774 kb on + strand, within SM_b21382 at 1045.774 kb on + strand, within SM_b21382 at 1045.775 kb on - strand, within SM_b21382 at 1045.775 kb on - strand, within SM_b21382 at 1045.923 kb on - strand, within SM_b21382 at 1045.949 kb on - strand, within SM_b21382 at 1045.996 kb on + strand, within SM_b21382 at 1046.149 kb on + strand at 1046.325 kb on + strand at 1046.326 kb on - strand at 1046.326 kb on - strand at 1046.326 kb on - strand at 1046.326 kb on - strand at 1046.370 kb on + strand at 1046.370 kb on + strand at 1046.370 kb on + strand at 1046.392 kb on - strand at 1046.392 kb on - strand at 1046.393 kb on + strand at 1046.393 kb on + strand at 1046.394 kb on - strand at 1046.620 kb on - strand, within SM_b21383 at 1046.650 kb on - strand, within SM_b21383 at 1046.659 kb on - strand, within SM_b21383 at 1046.681 kb on - strand, within SM_b21383 at 1046.703 kb on - strand, within SM_b21383 at 1046.936 kb on - strand, within SM_b21383 at 1047.005 kb on + strand, within SM_b21383 at 1047.032 kb on + strand, within SM_b21383 at 1047.033 kb on - strand, within SM_b21383 at 1047.033 kb on - strand, within SM_b21383 at 1047.056 kb on + strand, within SM_b21383 at 1047.056 kb on + strand, within SM_b21383 at 1047.057 kb on - strand, within SM_b21383 at 1047.057 kb on - strand, within SM_b21383 at 1047.227 kb on - strand at 1047.515 kb on + strand, within SM_b21384 at 1047.516 kb on - strand, within SM_b21384 at 1047.516 kb on - strand, within SM_b21384 at 1047.516 kb on - strand, within SM_b21384 at 1047.517 kb on + strand, within SM_b21384 at 1047.518 kb on - strand, within SM_b21384 at 1047.518 kb on - strand, within SM_b21384 at 1047.530 kb on + strand, within SM_b21384 at 1047.625 kb on + strand, within SM_b21384 at 1047.625 kb on + strand, within SM_b21384 at 1047.625 kb on + strand, within SM_b21384 at 1047.625 kb on + strand, within SM_b21384 at 1047.626 kb on - strand, within SM_b21384 at 1047.655 kb on + strand, within SM_b21384 at 1047.674 kb on + strand, within SM_b21384 at 1047.674 kb on + strand, within SM_b21384 at 1047.675 kb on - strand, within SM_b21384 at 1047.779 kb on + strand, within SM_b21384 at 1047.854 kb on + strand, within SM_b21384 at 1047.855 kb on - strand, within SM_b21384 at 1047.855 kb on - strand, within SM_b21384 at 1047.864 kb on + strand, within SM_b21384 at 1047.950 kb on - strand, within SM_b21384 at 1047.950 kb on - strand, within SM_b21384 at 1048.006 kb on - strand, within SM_b21384 at 1048.127 kb on - strand at 1048.151 kb on + strand at 1048.151 kb on + strand at 1048.152 kb on - strand at 1048.152 kb on - strand at 1048.152 kb on - strand at 1048.152 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.1 mM remove 1,045,544 + SM_b21381 0.84 -1.0 1,045,545 - SM_b21381 0.84 +0.4 1,045,545 - SM_b21381 0.84 +0.3 1,045,628 + +1.1 1,045,629 - -0.0 1,045,629 - +0.4 1,045,629 - +0.3 1,045,629 - -0.8 1,045,630 + -0.8 1,045,630 + -1.6 1,045,630 + -1.1 1,045,630 + +1.9 1,045,630 + +0.2 1,045,630 + +0.2 1,045,630 + -0.8 1,045,631 - -0.7 1,045,631 - -0.6 1,045,631 - -3.2 1,045,631 - +0.2 1,045,631 - -0.7 1,045,631 - +0.2 1,045,631 - +0.7 1,045,647 - +2.0 1,045,774 + SM_b21382 0.31 -0.8 1,045,774 + SM_b21382 0.31 +1.0 1,045,774 + SM_b21382 0.31 +0.2 1,045,775 - SM_b21382 0.31 -1.6 1,045,775 - SM_b21382 0.31 -0.7 1,045,923 - SM_b21382 0.60 +0.1 1,045,949 - SM_b21382 0.65 -0.3 1,045,996 + SM_b21382 0.74 -1.2 1,046,149 + +0.1 1,046,325 + +0.9 1,046,326 - +2.5 1,046,326 - +0.1 1,046,326 - -1.3 1,046,326 - +1.7 1,046,370 + -4.3 1,046,370 + +0.7 1,046,370 + +3.9 1,046,392 - -0.8 1,046,392 - +0.5 1,046,393 + -0.2 1,046,393 + -1.1 1,046,394 - -0.1 1,046,620 - SM_b21383 0.28 -0.8 1,046,650 - SM_b21383 0.32 +1.1 1,046,659 - SM_b21383 0.33 +0.7 1,046,681 - SM_b21383 0.35 +2.1 1,046,703 - SM_b21383 0.37 -1.8 1,046,936 - SM_b21383 0.64 -3.0 1,047,005 + SM_b21383 0.71 +0.5 1,047,032 + SM_b21383 0.74 +1.1 1,047,033 - SM_b21383 0.75 +0.4 1,047,033 - SM_b21383 0.75 +0.1 1,047,056 + SM_b21383 0.77 +0.3 1,047,056 + SM_b21383 0.77 -1.8 1,047,057 - SM_b21383 0.77 -2.4 1,047,057 - SM_b21383 0.77 +0.6 1,047,227 - -0.9 1,047,515 + SM_b21384 0.20 -1.0 1,047,516 - SM_b21384 0.21 +0.7 1,047,516 - SM_b21384 0.21 -0.9 1,047,516 - SM_b21384 0.21 +1.2 1,047,517 + SM_b21384 0.21 +0.5 1,047,518 - SM_b21384 0.21 +1.0 1,047,518 - SM_b21384 0.21 +1.1 1,047,530 + SM_b21384 0.22 -1.0 1,047,625 + SM_b21384 0.35 -0.2 1,047,625 + SM_b21384 0.35 -0.1 1,047,625 + SM_b21384 0.35 -0.4 1,047,625 + SM_b21384 0.35 -4.0 1,047,626 - SM_b21384 0.35 -2.8 1,047,655 + SM_b21384 0.39 +0.3 1,047,674 + SM_b21384 0.42 +0.5 1,047,674 + SM_b21384 0.42 +0.8 1,047,675 - SM_b21384 0.42 +1.7 1,047,779 + SM_b21384 0.56 -3.0 1,047,854 + SM_b21384 0.66 -0.2 1,047,855 - SM_b21384 0.66 +0.7 1,047,855 - SM_b21384 0.66 -0.6 1,047,864 + SM_b21384 0.67 -0.9 1,047,950 - SM_b21384 0.79 +0.1 1,047,950 - SM_b21384 0.79 -1.6 1,048,006 - SM_b21384 0.86 -0.6 1,048,127 - +0.4 1,048,151 + -1.5 1,048,151 + -1.8 1,048,152 - -1.1 1,048,152 - +1.3 1,048,152 - -0.5 1,048,152 - +0.8
Or see this region's nucleotide sequence