Experiment: Chlorite 0.1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21318 and SM_b21319 are separated by 183 nucleotides SM_b21319 and SM_b21320 overlap by 14 nucleotides
SM_b21318: SM_b21318 - glycosyltransferase, forming alpha-glycosyl linkages protein, at 984,623 to 985,876
_b21318
SM_b21319: SM_b21319 - hypothetical protein, at 986,060 to 987,532
_b21319
SM_b21320: SM_b21320 - bifunctional glycosyltransferase, at 987,519 to 990,200
_b21320
Position (kb) 986
987
988 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 985.145 kb on + strand, within SM_b21318 at 985.146 kb on - strand, within SM_b21318 at 985.252 kb on - strand, within SM_b21318 at 985.252 kb on - strand, within SM_b21318 at 985.510 kb on - strand, within SM_b21318 at 985.544 kb on + strand, within SM_b21318 at 985.545 kb on - strand, within SM_b21318 at 985.545 kb on - strand, within SM_b21318 at 985.545 kb on - strand, within SM_b21318 at 985.545 kb on - strand, within SM_b21318 at 985.554 kb on - strand, within SM_b21318 at 986.203 kb on + strand at 986.203 kb on + strand at 986.290 kb on + strand, within SM_b21319 at 986.291 kb on - strand, within SM_b21319 at 986.291 kb on - strand, within SM_b21319 at 986.517 kb on + strand, within SM_b21319 at 986.608 kb on + strand, within SM_b21319 at 986.609 kb on - strand, within SM_b21319 at 986.609 kb on - strand, within SM_b21319 at 986.687 kb on + strand, within SM_b21319 at 986.687 kb on + strand, within SM_b21319 at 986.687 kb on + strand, within SM_b21319 at 986.688 kb on - strand, within SM_b21319 at 986.729 kb on + strand, within SM_b21319 at 986.836 kb on - strand, within SM_b21319 at 987.451 kb on + strand at 987.451 kb on + strand at 987.495 kb on + strand at 987.495 kb on + strand at 987.496 kb on - strand at 987.496 kb on - strand at 987.702 kb on + strand at 987.703 kb on - strand at 987.783 kb on + strand at 987.783 kb on + strand at 987.870 kb on + strand, within SM_b21320 at 987.871 kb on - strand at 987.906 kb on + strand, within SM_b21320 at 987.906 kb on + strand, within SM_b21320 at 987.907 kb on - strand, within SM_b21320 at 987.907 kb on - strand, within SM_b21320 at 987.907 kb on - strand, within SM_b21320 at 987.909 kb on - strand, within SM_b21320 at 987.914 kb on + strand, within SM_b21320 at 987.914 kb on + strand, within SM_b21320 at 987.960 kb on + strand, within SM_b21320 at 987.992 kb on + strand, within SM_b21320 at 987.992 kb on + strand, within SM_b21320 at 987.992 kb on + strand, within SM_b21320
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.1 mM remove 985,145 + SM_b21318 0.42 +0.2 985,146 - SM_b21318 0.42 +0.5 985,252 - SM_b21318 0.50 +0.7 985,252 - SM_b21318 0.50 -0.1 985,510 - SM_b21318 0.71 -0.5 985,544 + SM_b21318 0.73 -1.6 985,545 - SM_b21318 0.74 +0.6 985,545 - SM_b21318 0.74 -2.1 985,545 - SM_b21318 0.74 +1.6 985,545 - SM_b21318 0.74 -2.0 985,554 - SM_b21318 0.74 -0.7 986,203 + -0.5 986,203 + +0.7 986,290 + SM_b21319 0.16 -1.3 986,291 - SM_b21319 0.16 -1.2 986,291 - SM_b21319 0.16 +1.2 986,517 + SM_b21319 0.31 -0.4 986,608 + SM_b21319 0.37 -1.2 986,609 - SM_b21319 0.37 -0.6 986,609 - SM_b21319 0.37 -2.1 986,687 + SM_b21319 0.43 +1.1 986,687 + SM_b21319 0.43 -1.1 986,687 + SM_b21319 0.43 -0.0 986,688 - SM_b21319 0.43 -1.3 986,729 + SM_b21319 0.45 -0.0 986,836 - SM_b21319 0.53 -2.6 987,451 + +0.1 987,451 + +0.1 987,495 + -0.6 987,495 + +0.9 987,496 - -0.3 987,496 - +0.7 987,702 + -1.1 987,703 - +0.2 987,783 + +0.3 987,783 + +0.0 987,870 + SM_b21320 0.13 -0.2 987,871 - +0.7 987,906 + SM_b21320 0.14 -1.8 987,906 + SM_b21320 0.14 +1.9 987,907 - SM_b21320 0.14 -0.0 987,907 - SM_b21320 0.14 +1.0 987,907 - SM_b21320 0.14 -1.0 987,909 - SM_b21320 0.15 +0.7 987,914 + SM_b21320 0.15 -0.2 987,914 + SM_b21320 0.15 -0.1 987,960 + SM_b21320 0.16 -1.3 987,992 + SM_b21320 0.18 -0.4 987,992 + SM_b21320 0.18 -0.5 987,992 + SM_b21320 0.18 +2.9
Or see this region's nucleotide sequence