Experiment: Aluminum chloride 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_5844 and Pf1N1B4_5845 are separated by 322 nucleotides Pf1N1B4_5845 and Pf1N1B4_5846 are separated by 117 nucleotides Pf1N1B4_5846 and Pf1N1B4_5847 are separated by 101 nucleotides
Pf1N1B4_5844 - Arginine/ornithine ABC transporter, periplasmic arginine/ornithine binding protein, at 278,578 to 279,357
_5844
Pf1N1B4_5845 - GMP synthase - Glutamine amidotransferase domain, at 279,680 to 280,321
_5845
Pf1N1B4_5846 - Rhodanese-related sulfurtransferase, at 280,439 to 280,873
_5846
Pf1N1B4_5847 - transcriptional activator FtrA, at 280,975 to 281,949
_5847
Position (kb) 279
280
281 Strain fitness (log2 ratio) -2
-1
0
1
2 at 278.726 kb on + strand, within Pf1N1B4_5844 at 278.726 kb on + strand at 278.726 kb on + strand, within Pf1N1B4_5844 at 278.727 kb on - strand, within Pf1N1B4_5844 at 278.741 kb on + strand, within Pf1N1B4_5844 at 278.742 kb on - strand, within Pf1N1B4_5844 at 278.742 kb on - strand, within Pf1N1B4_5844 at 278.742 kb on - strand, within Pf1N1B4_5844 at 278.753 kb on - strand, within Pf1N1B4_5844 at 279.033 kb on - strand, within Pf1N1B4_5844 at 279.033 kb on - strand at 279.033 kb on - strand, within Pf1N1B4_5844 at 279.035 kb on + strand at 279.035 kb on + strand at 279.035 kb on + strand, within Pf1N1B4_5844 at 279.036 kb on - strand, within Pf1N1B4_5844 at 279.359 kb on + strand at 279.359 kb on + strand at 279.360 kb on - strand at 279.360 kb on - strand at 279.362 kb on - strand at 279.362 kb on - strand at 279.483 kb on + strand at 279.483 kb on + strand at 279.484 kb on - strand at 279.484 kb on - strand at 279.487 kb on + strand at 279.489 kb on + strand at 279.516 kb on - strand at 279.840 kb on - strand, within Pf1N1B4_5845 at 280.369 kb on - strand at 280.369 kb on - strand at 280.369 kb on - strand at 280.403 kb on + strand at 280.404 kb on - strand at 280.612 kb on - strand, within Pf1N1B4_5846 at 280.774 kb on - strand, within Pf1N1B4_5846 at 280.880 kb on + strand at 280.880 kb on + strand at 280.881 kb on - strand at 280.914 kb on - strand at 280.914 kb on - strand at 281.011 kb on + strand at 281.012 kb on - strand at 281.197 kb on - strand, within Pf1N1B4_5847
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 2.5 mM remove 278,726 + Pf1N1B4_5844 0.19 -0.4 278,726 + -0.4 278,726 + Pf1N1B4_5844 0.19 -1.0 278,727 - Pf1N1B4_5844 0.19 -0.9 278,741 + Pf1N1B4_5844 0.21 +1.6 278,742 - Pf1N1B4_5844 0.21 +0.6 278,742 - Pf1N1B4_5844 0.21 +0.2 278,742 - Pf1N1B4_5844 0.21 +0.6 278,753 - Pf1N1B4_5844 0.22 -2.7 279,033 - Pf1N1B4_5844 0.58 +0.5 279,033 - +1.2 279,033 - Pf1N1B4_5844 0.58 +0.6 279,035 + -0.4 279,035 + +1.0 279,035 + Pf1N1B4_5844 0.59 -0.2 279,036 - Pf1N1B4_5844 0.59 +0.2 279,359 + -0.4 279,359 + -0.4 279,360 - -0.4 279,360 - -0.4 279,362 - +1.2 279,362 - -0.4 279,483 + +0.6 279,483 + +0.3 279,484 - +1.1 279,484 - +0.4 279,487 + +1.6 279,489 + -0.6 279,516 - +0.4 279,840 - Pf1N1B4_5845 0.25 -1.4 280,369 - +1.4 280,369 - +1.8 280,369 - +0.2 280,403 + +1.0 280,404 - -1.4 280,612 - Pf1N1B4_5846 0.40 -0.6 280,774 - Pf1N1B4_5846 0.77 +1.2 280,880 + -0.4 280,880 + +1.4 280,881 - -1.4 280,914 - -0.8 280,914 - +1.6 281,011 + +1.1 281,012 - +0.2 281,197 - Pf1N1B4_5847 0.23 +2.0
Or see this region's nucleotide sequence