Experiment: Aluminum chloride 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_5841 and Pf1N1B4_5842 are separated by 137 nucleotides Pf1N1B4_5842 and Pf1N1B4_5843 are separated by 11 nucleotides Pf1N1B4_5843 and Pf1N1B4_5844 are separated by 164 nucleotides
Pf1N1B4_5841 - Radical SAM domain protein, at 275,158 to 276,960
_5841
Pf1N1B4_5842 - Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase), at 277,098 to 277,685
_5842
Pf1N1B4_5843 - phospholipase/carboxylesterase family protein, at 277,697 to 278,413
_5843
Pf1N1B4_5844 - Arginine/ornithine ABC transporter, periplasmic arginine/ornithine binding protein, at 278,578 to 279,357
_5844
Position (kb) 277
278 Strain fitness (log2 ratio) -2
-1
0
1
2 at 276.106 kb on + strand, within Pf1N1B4_5841 at 276.107 kb on - strand, within Pf1N1B4_5841 at 276.238 kb on + strand at 276.463 kb on + strand, within Pf1N1B4_5841 at 276.463 kb on + strand, within Pf1N1B4_5841 at 276.464 kb on - strand, within Pf1N1B4_5841 at 276.464 kb on - strand, within Pf1N1B4_5841 at 276.464 kb on - strand, within Pf1N1B4_5841 at 276.472 kb on + strand, within Pf1N1B4_5841 at 276.681 kb on + strand, within Pf1N1B4_5841 at 276.682 kb on - strand, within Pf1N1B4_5841 at 276.717 kb on + strand, within Pf1N1B4_5841 at 276.718 kb on - strand, within Pf1N1B4_5841 at 276.776 kb on - strand, within Pf1N1B4_5841 at 276.776 kb on - strand, within Pf1N1B4_5841 at 276.776 kb on - strand, within Pf1N1B4_5841 at 276.787 kb on + strand at 276.787 kb on + strand at 276.787 kb on + strand at 276.787 kb on + strand at 276.788 kb on - strand at 276.788 kb on - strand at 276.788 kb on - strand at 276.788 kb on - strand at 276.788 kb on - strand at 276.802 kb on + strand at 277.112 kb on + strand at 277.683 kb on + strand at 277.683 kb on + strand at 277.684 kb on - strand at 278.034 kb on - strand, within Pf1N1B4_5843 at 278.056 kb on - strand, within Pf1N1B4_5843 at 278.205 kb on + strand, within Pf1N1B4_5843 at 278.205 kb on + strand, within Pf1N1B4_5843 at 278.205 kb on + strand, within Pf1N1B4_5843 at 278.205 kb on + strand, within Pf1N1B4_5843 at 278.206 kb on - strand, within Pf1N1B4_5843 at 278.211 kb on + strand, within Pf1N1B4_5843 at 278.325 kb on + strand at 278.413 kb on + strand at 278.413 kb on + strand at 278.413 kb on + strand at 278.413 kb on + strand at 278.413 kb on + strand at 278.413 kb on + strand at 278.413 kb on + strand at 278.414 kb on - strand at 278.453 kb on + strand at 278.521 kb on + strand at 278.521 kb on + strand at 278.521 kb on + strand at 278.521 kb on + strand at 278.521 kb on + strand at 278.570 kb on - strand at 278.577 kb on - strand at 278.577 kb on - strand at 278.579 kb on + strand at 278.580 kb on - strand at 278.606 kb on + strand at 278.606 kb on + strand at 278.607 kb on - strand at 278.607 kb on - strand at 278.627 kb on + strand at 278.628 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 2.5 mM remove 276,106 + Pf1N1B4_5841 0.53 +0.6 276,107 - Pf1N1B4_5841 0.53 +0.6 276,238 + -1.4 276,463 + Pf1N1B4_5841 0.72 +0.6 276,463 + Pf1N1B4_5841 0.72 +0.9 276,464 - Pf1N1B4_5841 0.72 +0.9 276,464 - Pf1N1B4_5841 0.72 +0.7 276,464 - Pf1N1B4_5841 0.72 +1.7 276,472 + Pf1N1B4_5841 0.73 -2.0 276,681 + Pf1N1B4_5841 0.84 +0.3 276,682 - Pf1N1B4_5841 0.85 -2.4 276,717 + Pf1N1B4_5841 0.86 +0.6 276,718 - Pf1N1B4_5841 0.87 +0.3 276,776 - Pf1N1B4_5841 0.90 -0.4 276,776 - Pf1N1B4_5841 0.90 -2.0 276,776 - Pf1N1B4_5841 0.90 -2.0 276,787 + -0.4 276,787 + +1.6 276,787 + -0.3 276,787 + +0.9 276,788 - -2.4 276,788 - -0.5 276,788 - +0.6 276,788 - +0.6 276,788 - +1.6 276,802 + -0.4 277,112 + +1.2 277,683 + +1.0 277,683 + -1.1 277,684 - +1.2 278,034 - Pf1N1B4_5843 0.47 -1.4 278,056 - Pf1N1B4_5843 0.50 -0.4 278,205 + Pf1N1B4_5843 0.71 +0.4 278,205 + Pf1N1B4_5843 0.71 -1.9 278,205 + Pf1N1B4_5843 0.71 -0.7 278,205 + Pf1N1B4_5843 0.71 -1.4 278,206 - Pf1N1B4_5843 0.71 +0.6 278,211 + Pf1N1B4_5843 0.72 -0.4 278,325 + -0.4 278,413 + +0.2 278,413 + +1.6 278,413 + +0.8 278,413 + -2.7 278,413 + +0.8 278,413 + -1.4 278,413 + -1.2 278,414 - +0.6 278,453 + -0.1 278,521 + +0.6 278,521 + -0.0 278,521 + +1.3 278,521 + -0.0 278,521 + +0.1 278,570 - +1.5 278,577 - -0.8 278,577 - -0.1 278,579 + -1.4 278,580 - +2.0 278,606 + +0.3 278,606 + +2.1 278,607 - +1.4 278,607 - +0.3 278,627 + -0.4 278,628 - -0.4
Or see this region's nucleotide sequence