Experiment: Aluminum chloride 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_4767 and Pf1N1B4_4768 are separated by 247 nucleotides Pf1N1B4_4768 and Pf1N1B4_4769 are separated by 253 nucleotides Pf1N1B4_4769 and Pf1N1B4_4770 are separated by 118 nucleotides
Pf1N1B4_4767 - 2-ketogluconate utilization repressor PtxS, at 5,263,551 to 5,264,576
_4767
Pf1N1B4_4768 - hypothetical protein, at 5,264,824 to 5,267,631
_4768
Pf1N1B4_4769 - hypothetical protein, at 5,267,885 to 5,268,076
_4769
Pf1N1B4_4770 - Putative autotransporter, at 5,268,195 to 5,270,408
_4770
Position (kb) 5264
5265
5266
5267
5268 Strain fitness (log2 ratio) -2
-1
0
1 at 5264.204 kb on - strand, within Pf1N1B4_4767 at 5264.855 kb on + strand at 5265.029 kb on - strand at 5265.070 kb on + strand at 5265.438 kb on - strand at 5265.544 kb on - strand at 5265.723 kb on + strand, within Pf1N1B4_4768 at 5265.739 kb on + strand, within Pf1N1B4_4768 at 5265.862 kb on + strand, within Pf1N1B4_4768 at 5265.954 kb on + strand, within Pf1N1B4_4768 at 5265.977 kb on - strand, within Pf1N1B4_4768 at 5266.317 kb on + strand, within Pf1N1B4_4768 at 5266.321 kb on - strand at 5266.321 kb on - strand, within Pf1N1B4_4768 at 5266.356 kb on + strand, within Pf1N1B4_4768 at 5266.357 kb on - strand at 5266.968 kb on + strand, within Pf1N1B4_4768 at 5267.090 kb on + strand, within Pf1N1B4_4768 at 5267.257 kb on + strand, within Pf1N1B4_4768 at 5267.274 kb on + strand, within Pf1N1B4_4768 at 5267.288 kb on + strand, within Pf1N1B4_4768 at 5267.362 kb on - strand at 5267.413 kb on + strand at 5267.413 kb on + strand at 5267.413 kb on + strand at 5267.418 kb on + strand at 5267.418 kb on + strand at 5267.453 kb on + strand at 5267.453 kb on + strand at 5267.515 kb on + strand at 5267.523 kb on + strand at 5267.523 kb on + strand at 5267.523 kb on + strand at 5267.634 kb on - strand at 5267.795 kb on - strand at 5267.850 kb on + strand at 5267.959 kb on - strand, within Pf1N1B4_4769 at 5268.275 kb on + strand at 5268.275 kb on + strand at 5268.276 kb on - strand at 5268.276 kb on - strand at 5268.508 kb on + strand, within Pf1N1B4_4770
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 2.5 mM remove 5,264,204 - Pf1N1B4_4767 0.64 +1.4 5,264,855 + -0.6 5,265,029 - +0.4 5,265,070 + -1.6 5,265,438 - +1.4 5,265,544 - -1.6 5,265,723 + Pf1N1B4_4768 0.32 +0.7 5,265,739 + Pf1N1B4_4768 0.33 +0.5 5,265,862 + Pf1N1B4_4768 0.37 +1.1 5,265,954 + Pf1N1B4_4768 0.40 +1.1 5,265,977 - Pf1N1B4_4768 0.41 +0.4 5,266,317 + Pf1N1B4_4768 0.53 +0.5 5,266,321 - +0.7 5,266,321 - Pf1N1B4_4768 0.53 +0.4 5,266,356 + Pf1N1B4_4768 0.55 +0.8 5,266,357 - -0.6 5,266,968 + Pf1N1B4_4768 0.76 +1.0 5,267,090 + Pf1N1B4_4768 0.81 +0.4 5,267,257 + Pf1N1B4_4768 0.87 +1.4 5,267,274 + Pf1N1B4_4768 0.87 +0.4 5,267,288 + Pf1N1B4_4768 0.88 +1.4 5,267,362 - +0.2 5,267,413 + -0.4 5,267,413 + -1.3 5,267,413 + -2.2 5,267,418 + -1.6 5,267,418 + -0.3 5,267,453 + +0.4 5,267,453 + -0.4 5,267,515 + -0.4 5,267,523 + -0.6 5,267,523 + +1.0 5,267,523 + +1.4 5,267,634 - -1.6 5,267,795 - -1.6 5,267,850 + +0.7 5,267,959 - Pf1N1B4_4769 0.39 -0.6 5,268,275 + -0.6 5,268,275 + -0.6 5,268,276 - -0.4 5,268,276 - +0.2 5,268,508 + Pf1N1B4_4770 0.14 +1.2
Or see this region's nucleotide sequence