Experiment: Aluminum chloride 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_4551 and Pf1N1B4_4552 overlap by 4 nucleotides Pf1N1B4_4552 and Pf1N1B4_4553 are separated by 46 nucleotides
Pf1N1B4_4551 - 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179), at 5,019,458 to 5,020,723
_4551
Pf1N1B4_4552 - 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.41), at 5,020,720 to 5,021,940
_4552
Pf1N1B4_4553 - FIG00959354: hypothetical protein, at 5,021,987 to 5,024,857
_4553
Position (kb) 5020
5021
5022 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5020.076 kb on + strand at 5020.268 kb on + strand, within Pf1N1B4_4551 at 5020.559 kb on - strand, within Pf1N1B4_4551 at 5020.610 kb on + strand at 5020.610 kb on + strand at 5020.706 kb on + strand at 5020.707 kb on - strand at 5020.707 kb on - strand at 5020.708 kb on + strand at 5020.709 kb on - strand at 5021.205 kb on + strand, within Pf1N1B4_4552 at 5021.205 kb on + strand, within Pf1N1B4_4552 at 5021.205 kb on + strand, within Pf1N1B4_4552 at 5021.260 kb on + strand, within Pf1N1B4_4552 at 5021.260 kb on + strand at 5021.260 kb on + strand, within Pf1N1B4_4552 at 5021.260 kb on + strand, within Pf1N1B4_4552 at 5021.260 kb on + strand, within Pf1N1B4_4552 at 5021.261 kb on - strand, within Pf1N1B4_4552 at 5021.340 kb on + strand, within Pf1N1B4_4552 at 5021.341 kb on - strand, within Pf1N1B4_4552 at 5021.600 kb on + strand, within Pf1N1B4_4552 at 5021.679 kb on + strand, within Pf1N1B4_4552 at 5021.679 kb on + strand, within Pf1N1B4_4552 at 5021.680 kb on - strand at 5021.680 kb on - strand, within Pf1N1B4_4552 at 5021.680 kb on - strand, within Pf1N1B4_4552 at 5021.999 kb on - strand at 5022.077 kb on - strand at 5022.086 kb on + strand at 5022.786 kb on + strand, within Pf1N1B4_4553 at 5022.881 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 2.5 mM remove 5,020,076 + +1.0 5,020,268 + Pf1N1B4_4551 0.64 -0.2 5,020,559 - Pf1N1B4_4551 0.87 +0.3 5,020,610 + -0.6 5,020,610 + +1.4 5,020,706 + -0.6 5,020,707 - -2.0 5,020,707 - +1.3 5,020,708 + +0.7 5,020,709 - -0.2 5,021,205 + Pf1N1B4_4552 0.40 -0.1 5,021,205 + Pf1N1B4_4552 0.40 +1.6 5,021,205 + Pf1N1B4_4552 0.40 +1.0 5,021,260 + Pf1N1B4_4552 0.44 +1.0 5,021,260 + -0.6 5,021,260 + Pf1N1B4_4552 0.44 -0.2 5,021,260 + Pf1N1B4_4552 0.44 +0.7 5,021,260 + Pf1N1B4_4552 0.44 -0.9 5,021,261 - Pf1N1B4_4552 0.44 +1.1 5,021,340 + Pf1N1B4_4552 0.51 -0.6 5,021,341 - Pf1N1B4_4552 0.51 +0.6 5,021,600 + Pf1N1B4_4552 0.72 +2.3 5,021,679 + Pf1N1B4_4552 0.79 +1.1 5,021,679 + Pf1N1B4_4552 0.79 -1.3 5,021,680 - -0.6 5,021,680 - Pf1N1B4_4552 0.79 +0.4 5,021,680 - Pf1N1B4_4552 0.79 +1.0 5,021,999 - -0.6 5,022,077 - +0.9 5,022,086 + -2.6 5,022,786 + Pf1N1B4_4553 0.28 -0.6 5,022,881 + +0.4
Or see this region's nucleotide sequence