Experiment: Cephalothin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3542 and Ac3H11_3543 overlap by 15 nucleotides Ac3H11_3543 and Ac3H11_3544 are separated by 95 nucleotides
Ac3H11_3542 - Valyl-tRNA synthetase (EC 6.1.1.9), at 91,035 to 93,932
_3542
Ac3H11_3543 - hypothetical protein, at 93,918 to 94,127
_3543
Ac3H11_3544 - FIG00349188: hypothetical protein, at 94,223 to 96,109
_3544
Position (kb)
93
94
95 Strain fitness (log2 ratio)
-2
-1
0
1 at 94.091 kb on + strand, within Ac3H11_3543 at 94.092 kb on - strand, within Ac3H11_3543 at 94.129 kb on - strand at 94.202 kb on + strand at 94.202 kb on + strand at 94.202 kb on + strand at 94.203 kb on - strand at 94.203 kb on - strand at 94.203 kb on - strand at 94.203 kb on - strand at 94.204 kb on + strand at 94.204 kb on + strand at 94.204 kb on + strand at 94.204 kb on + strand at 94.204 kb on + strand at 94.204 kb on + strand at 94.204 kb on + strand at 94.204 kb on + strand at 94.205 kb on - strand at 94.205 kb on - strand at 94.205 kb on - strand at 94.205 kb on - strand at 94.205 kb on - strand at 94.205 kb on - strand at 94.325 kb on + strand at 94.325 kb on + strand at 94.326 kb on - strand at 94.427 kb on + strand, within Ac3H11_3544 at 94.427 kb on + strand, within Ac3H11_3544 at 94.427 kb on + strand, within Ac3H11_3544 at 94.427 kb on + strand, within Ac3H11_3544 at 94.428 kb on - strand, within Ac3H11_3544 at 94.428 kb on - strand, within Ac3H11_3544 at 94.428 kb on - strand, within Ac3H11_3544 at 94.428 kb on - strand, within Ac3H11_3544 at 94.428 kb on - strand, within Ac3H11_3544 at 94.428 kb on - strand, within Ac3H11_3544 at 94.428 kb on - strand, within Ac3H11_3544 at 94.637 kb on + strand, within Ac3H11_3544 at 94.637 kb on + strand, within Ac3H11_3544 at 94.637 kb on + strand, within Ac3H11_3544 at 94.637 kb on + strand, within Ac3H11_3544 at 94.637 kb on + strand, within Ac3H11_3544 at 94.637 kb on + strand, within Ac3H11_3544 at 94.638 kb on - strand, within Ac3H11_3544 at 94.638 kb on - strand, within Ac3H11_3544 at 94.638 kb on - strand, within Ac3H11_3544 at 94.638 kb on - strand, within Ac3H11_3544 at 94.638 kb on - strand, within Ac3H11_3544 at 94.757 kb on + strand, within Ac3H11_3544 at 94.757 kb on + strand, within Ac3H11_3544 at 94.757 kb on + strand, within Ac3H11_3544 at 94.757 kb on + strand, within Ac3H11_3544 at 94.757 kb on + strand, within Ac3H11_3544 at 94.758 kb on - strand, within Ac3H11_3544 at 94.999 kb on + strand, within Ac3H11_3544
Per-strain Table
Position Strand Gene LocusTag Fraction Cephalothin 0.005 mg/ml remove 94,091 + Ac3H11_3543 0.82 +0.0 94,092 - Ac3H11_3543 0.83 -0.3 94,129 - -0.3 94,202 + +0.2 94,202 + -0.7 94,202 + -0.5 94,203 - -2.2 94,203 - -0.3 94,203 - +1.0 94,203 - -0.3 94,204 + -0.0 94,204 + -0.6 94,204 + -1.6 94,204 + -0.5 94,204 + +0.1 94,204 + -1.0 94,204 + -0.8 94,204 + -0.5 94,205 - -1.6 94,205 - +1.5 94,205 - -0.2 94,205 - -0.2 94,205 - +0.5 94,205 - -1.3 94,325 + +0.5 94,325 + -1.4 94,326 - +1.2 94,427 + Ac3H11_3544 0.11 -0.3 94,427 + Ac3H11_3544 0.11 -0.3 94,427 + Ac3H11_3544 0.11 -0.3 94,427 + Ac3H11_3544 0.11 +0.1 94,428 - Ac3H11_3544 0.11 +0.4 94,428 - Ac3H11_3544 0.11 +0.4 94,428 - Ac3H11_3544 0.11 +0.2 94,428 - Ac3H11_3544 0.11 -0.3 94,428 - Ac3H11_3544 0.11 +0.4 94,428 - Ac3H11_3544 0.11 -0.9 94,428 - Ac3H11_3544 0.11 +1.0 94,637 + Ac3H11_3544 0.22 -0.2 94,637 + Ac3H11_3544 0.22 +0.6 94,637 + Ac3H11_3544 0.22 -0.2 94,637 + Ac3H11_3544 0.22 -0.2 94,637 + Ac3H11_3544 0.22 +0.4 94,637 + Ac3H11_3544 0.22 +0.2 94,638 - Ac3H11_3544 0.22 +0.0 94,638 - Ac3H11_3544 0.22 -0.1 94,638 - Ac3H11_3544 0.22 -0.5 94,638 - Ac3H11_3544 0.22 -0.2 94,638 - Ac3H11_3544 0.22 +0.2 94,757 + Ac3H11_3544 0.28 +0.2 94,757 + Ac3H11_3544 0.28 -0.0 94,757 + Ac3H11_3544 0.28 -0.6 94,757 + Ac3H11_3544 0.28 +1.5 94,757 + Ac3H11_3544 0.28 +1.4 94,758 - Ac3H11_3544 0.28 +1.0 94,999 + Ac3H11_3544 0.41 -0.5
Or see this region's nucleotide sequence