Experiment: Bacitracin 0.12 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_2928 and Ga0059261_2929 are separated by 30 nucleotides Ga0059261_2929 and Ga0059261_2930 are separated by 36 nucleotides
Ga0059261_2928: Ga0059261_2928 - oxygen-dependent methionine synthase, putative oxygenase component MesX (from data) , at 3,036,198 to 3,037,184
_2928
Ga0059261_2929: Ga0059261_2929 - oxygen-dependent methionine synthase, methyltransferase component MesD (from data) , at 3,037,215 to 3,038,243
_2929
Ga0059261_2930: Ga0059261_2930 - Predicted Na+-dependent transporter, at 3,038,280 to 3,039,302
_2930
Position (kb)
3037
3038
3039 Strain fitness (log2 ratio)
-2
-1
0
1 at 3036.253 kb on - strand at 3036.402 kb on + strand, within Ga0059261_2928 at 3036.598 kb on - strand, within Ga0059261_2928 at 3036.598 kb on - strand, within Ga0059261_2928 at 3036.598 kb on - strand, within Ga0059261_2928 at 3036.598 kb on - strand, within Ga0059261_2928 at 3036.662 kb on + strand, within Ga0059261_2928 at 3036.688 kb on - strand, within Ga0059261_2928 at 3036.747 kb on + strand, within Ga0059261_2928 at 3036.747 kb on + strand, within Ga0059261_2928 at 3036.822 kb on + strand, within Ga0059261_2928 at 3036.823 kb on - strand, within Ga0059261_2928 at 3036.852 kb on + strand, within Ga0059261_2928 at 3036.882 kb on + strand, within Ga0059261_2928 at 3036.891 kb on + strand, within Ga0059261_2928 at 3036.891 kb on + strand, within Ga0059261_2928 at 3036.892 kb on - strand, within Ga0059261_2928 at 3036.919 kb on - strand, within Ga0059261_2928 at 3036.919 kb on - strand at 3036.919 kb on - strand at 3036.920 kb on + strand, within Ga0059261_2928 at 3036.990 kb on + strand, within Ga0059261_2928 at 3036.990 kb on + strand, within Ga0059261_2928 at 3037.020 kb on + strand, within Ga0059261_2928 at 3037.021 kb on - strand, within Ga0059261_2928 at 3037.047 kb on + strand, within Ga0059261_2928 at 3037.199 kb on + strand at 3037.199 kb on + strand at 3037.199 kb on + strand at 3037.199 kb on + strand at 3037.200 kb on - strand at 3037.220 kb on + strand at 3037.220 kb on + strand at 3037.220 kb on + strand at 3037.221 kb on - strand at 3037.221 kb on - strand at 3037.221 kb on - strand at 3037.222 kb on + strand at 3037.223 kb on - strand at 3037.223 kb on - strand at 3037.223 kb on - strand at 3037.494 kb on + strand, within Ga0059261_2929 at 3037.495 kb on - strand, within Ga0059261_2929 at 3037.632 kb on - strand, within Ga0059261_2929 at 3037.854 kb on + strand, within Ga0059261_2929 at 3037.917 kb on + strand, within Ga0059261_2929 at 3037.918 kb on - strand, within Ga0059261_2929 at 3038.133 kb on + strand, within Ga0059261_2929 at 3038.316 kb on + strand at 3038.316 kb on + strand at 3038.316 kb on + strand at 3038.316 kb on + strand at 3038.316 kb on + strand at 3038.317 kb on - strand at 3038.317 kb on - strand at 3038.318 kb on + strand at 3038.318 kb on + strand at 3038.318 kb on + strand at 3038.318 kb on + strand at 3038.319 kb on - strand at 3038.319 kb on - strand at 3038.433 kb on + strand, within Ga0059261_2930 at 3038.434 kb on - strand, within Ga0059261_2930 at 3038.434 kb on - strand, within Ga0059261_2930 at 3038.434 kb on - strand at 3038.565 kb on + strand, within Ga0059261_2930 at 3038.566 kb on - strand, within Ga0059261_2930 at 3038.566 kb on - strand, within Ga0059261_2930 at 3038.831 kb on + strand, within Ga0059261_2930 at 3038.832 kb on - strand, within Ga0059261_2930 at 3038.832 kb on - strand, within Ga0059261_2930 at 3038.914 kb on - strand, within Ga0059261_2930 at 3038.914 kb on - strand, within Ga0059261_2930 at 3038.914 kb on - strand, within Ga0059261_2930
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.12 mg/ml remove 3,036,253 - -1.2 3,036,402 + Ga0059261_2928 0.21 -0.9 3,036,598 - Ga0059261_2928 0.41 +0.7 3,036,598 - Ga0059261_2928 0.41 +0.3 3,036,598 - Ga0059261_2928 0.41 -0.8 3,036,598 - Ga0059261_2928 0.41 -0.1 3,036,662 + Ga0059261_2928 0.47 -2.3 3,036,688 - Ga0059261_2928 0.50 +1.6 3,036,747 + Ga0059261_2928 0.56 +0.0 3,036,747 + Ga0059261_2928 0.56 +0.5 3,036,822 + Ga0059261_2928 0.63 +0.2 3,036,823 - Ga0059261_2928 0.63 +0.8 3,036,852 + Ga0059261_2928 0.66 +0.1 3,036,882 + Ga0059261_2928 0.69 +0.8 3,036,891 + Ga0059261_2928 0.70 +0.9 3,036,891 + Ga0059261_2928 0.70 +0.3 3,036,892 - Ga0059261_2928 0.70 +0.2 3,036,919 - Ga0059261_2928 0.73 +0.1 3,036,919 - +1.0 3,036,919 - -0.2 3,036,920 + Ga0059261_2928 0.73 +1.6 3,036,990 + Ga0059261_2928 0.80 -1.4 3,036,990 + Ga0059261_2928 0.80 +0.0 3,037,020 + Ga0059261_2928 0.83 -0.7 3,037,021 - Ga0059261_2928 0.83 +1.1 3,037,047 + Ga0059261_2928 0.86 -0.4 3,037,199 + +0.4 3,037,199 + +0.9 3,037,199 + +0.2 3,037,199 + -0.7 3,037,200 - -0.6 3,037,220 + +0.6 3,037,220 + -1.3 3,037,220 + +0.3 3,037,221 - -0.2 3,037,221 - +0.0 3,037,221 - -0.6 3,037,222 + +0.4 3,037,223 - -0.8 3,037,223 - -1.9 3,037,223 - -1.6 3,037,494 + Ga0059261_2929 0.27 -0.4 3,037,495 - Ga0059261_2929 0.27 -0.9 3,037,632 - Ga0059261_2929 0.41 +0.6 3,037,854 + Ga0059261_2929 0.62 +1.0 3,037,917 + Ga0059261_2929 0.68 +0.4 3,037,918 - Ga0059261_2929 0.68 +0.0 3,038,133 + Ga0059261_2929 0.89 -1.2 3,038,316 + +0.6 3,038,316 + -0.1 3,038,316 + +0.3 3,038,316 + -0.6 3,038,316 + +0.2 3,038,317 - +0.0 3,038,317 - +1.4 3,038,318 + -0.6 3,038,318 + +1.2 3,038,318 + -1.3 3,038,318 + -0.6 3,038,319 - -0.9 3,038,319 - -1.3 3,038,433 + Ga0059261_2930 0.15 +0.5 3,038,434 - Ga0059261_2930 0.15 -0.9 3,038,434 - Ga0059261_2930 0.15 +0.5 3,038,434 - +1.6 3,038,565 + Ga0059261_2930 0.28 -0.3 3,038,566 - Ga0059261_2930 0.28 +0.0 3,038,566 - Ga0059261_2930 0.28 +0.6 3,038,831 + Ga0059261_2930 0.54 +1.4 3,038,832 - Ga0059261_2930 0.54 +0.5 3,038,832 - Ga0059261_2930 0.54 -0.9 3,038,914 - Ga0059261_2930 0.62 -0.6 3,038,914 - Ga0059261_2930 0.62 -0.8 3,038,914 - Ga0059261_2930 0.62 -0.1
Or see this region's nucleotide sequence