Experiment: Bacitracin 0.12 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_1927 and Ga0059261_1928 are separated by 60 nucleotides Ga0059261_1928 and Ga0059261_1929 overlap by 4 nucleotides Ga0059261_1929 and Ga0059261_1930 are separated by 66 nucleotides
Ga0059261_1927: Ga0059261_1927 - hypothetical protein, at 2,035,449 to 2,036,453
_1927
Ga0059261_1928: Ga0059261_1928 - Predicted permeases, at 2,036,514 to 2,037,428
_1928
Ga0059261_1929: Ga0059261_1929 - Putative transmembrane protein (Alph_Pro_TM), at 2,037,425 to 2,038,237
_1929
Ga0059261_1930: Ga0059261_1930 - Predicted ATPase, at 2,038,304 to 2,039,977
_1930
Position (kb)
2036
2037
2038 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2035.935 kb on + strand, within Ga0059261_1927 at 2035.935 kb on + strand, within Ga0059261_1927 at 2035.935 kb on + strand, within Ga0059261_1927 at 2035.935 kb on + strand, within Ga0059261_1927 at 2035.935 kb on + strand, within Ga0059261_1927 at 2035.935 kb on + strand, within Ga0059261_1927 at 2035.936 kb on - strand, within Ga0059261_1927 at 2035.936 kb on - strand, within Ga0059261_1927 at 2035.936 kb on - strand, within Ga0059261_1927 at 2036.124 kb on + strand, within Ga0059261_1927 at 2036.125 kb on - strand, within Ga0059261_1927 at 2036.125 kb on - strand, within Ga0059261_1927 at 2036.125 kb on - strand, within Ga0059261_1927 at 2036.163 kb on + strand, within Ga0059261_1927 at 2036.163 kb on + strand, within Ga0059261_1927 at 2036.163 kb on + strand, within Ga0059261_1927 at 2036.164 kb on - strand, within Ga0059261_1927 at 2036.452 kb on - strand at 2036.499 kb on - strand at 2036.499 kb on - strand at 2036.523 kb on + strand at 2036.523 kb on + strand at 2036.523 kb on + strand at 2036.756 kb on + strand, within Ga0059261_1928 at 2036.756 kb on + strand at 2036.756 kb on + strand, within Ga0059261_1928 at 2036.865 kb on + strand, within Ga0059261_1928 at 2036.865 kb on + strand, within Ga0059261_1928 at 2036.865 kb on + strand, within Ga0059261_1928 at 2036.865 kb on + strand, within Ga0059261_1928 at 2036.866 kb on - strand, within Ga0059261_1928 at 2037.012 kb on + strand, within Ga0059261_1928 at 2037.027 kb on + strand, within Ga0059261_1928 at 2037.027 kb on + strand, within Ga0059261_1928 at 2037.028 kb on - strand, within Ga0059261_1928 at 2037.028 kb on - strand, within Ga0059261_1928 at 2037.130 kb on - strand, within Ga0059261_1928 at 2037.130 kb on - strand, within Ga0059261_1928 at 2037.130 kb on - strand, within Ga0059261_1928 at 2037.576 kb on - strand, within Ga0059261_1929 at 2037.576 kb on - strand, within Ga0059261_1929 at 2037.779 kb on + strand, within Ga0059261_1929 at 2037.779 kb on + strand, within Ga0059261_1929 at 2037.780 kb on - strand, within Ga0059261_1929 at 2037.780 kb on - strand, within Ga0059261_1929 at 2037.780 kb on - strand, within Ga0059261_1929 at 2037.780 kb on - strand, within Ga0059261_1929 at 2037.780 kb on - strand, within Ga0059261_1929 at 2037.780 kb on - strand, within Ga0059261_1929 at 2037.780 kb on - strand at 2037.839 kb on + strand, within Ga0059261_1929 at 2037.839 kb on + strand, within Ga0059261_1929 at 2037.839 kb on + strand, within Ga0059261_1929 at 2037.840 kb on - strand, within Ga0059261_1929 at 2037.840 kb on - strand, within Ga0059261_1929 at 2037.950 kb on + strand, within Ga0059261_1929 at 2037.950 kb on + strand, within Ga0059261_1929 at 2037.953 kb on + strand, within Ga0059261_1929 at 2037.953 kb on + strand, within Ga0059261_1929 at 2037.953 kb on + strand, within Ga0059261_1929 at 2037.954 kb on - strand, within Ga0059261_1929 at 2037.954 kb on - strand, within Ga0059261_1929 at 2038.092 kb on + strand, within Ga0059261_1929 at 2038.166 kb on + strand at 2038.166 kb on + strand at 2038.235 kb on + strand at 2038.257 kb on + strand at 2038.257 kb on + strand at 2038.257 kb on + strand at 2038.258 kb on - strand at 2038.273 kb on + strand at 2038.273 kb on + strand at 2038.273 kb on + strand at 2038.273 kb on + strand at 2038.274 kb on - strand at 2038.387 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.12 mg/ml remove 2,035,935 + Ga0059261_1927 0.48 -1.3 2,035,935 + Ga0059261_1927 0.48 -0.7 2,035,935 + Ga0059261_1927 0.48 +1.7 2,035,935 + Ga0059261_1927 0.48 +2.7 2,035,935 + Ga0059261_1927 0.48 +0.2 2,035,935 + Ga0059261_1927 0.48 -0.9 2,035,936 - Ga0059261_1927 0.48 -0.5 2,035,936 - Ga0059261_1927 0.48 +0.3 2,035,936 - Ga0059261_1927 0.48 -0.1 2,036,124 + Ga0059261_1927 0.67 -0.3 2,036,125 - Ga0059261_1927 0.67 -0.1 2,036,125 - Ga0059261_1927 0.67 -0.6 2,036,125 - Ga0059261_1927 0.67 -0.3 2,036,163 + Ga0059261_1927 0.71 +0.4 2,036,163 + Ga0059261_1927 0.71 +0.0 2,036,163 + Ga0059261_1927 0.71 -0.1 2,036,164 - Ga0059261_1927 0.71 -0.5 2,036,452 - -0.7 2,036,499 - -0.6 2,036,499 - -0.7 2,036,523 + -0.9 2,036,523 + -1.9 2,036,523 + -0.1 2,036,756 + Ga0059261_1928 0.26 -0.0 2,036,756 + +0.7 2,036,756 + Ga0059261_1928 0.26 -1.4 2,036,865 + Ga0059261_1928 0.38 -2.4 2,036,865 + Ga0059261_1928 0.38 +1.1 2,036,865 + Ga0059261_1928 0.38 -0.9 2,036,865 + Ga0059261_1928 0.38 -1.7 2,036,866 - Ga0059261_1928 0.38 -1.3 2,037,012 + Ga0059261_1928 0.54 +0.2 2,037,027 + Ga0059261_1928 0.56 -0.2 2,037,027 + Ga0059261_1928 0.56 -2.5 2,037,028 - Ga0059261_1928 0.56 -0.7 2,037,028 - Ga0059261_1928 0.56 -1.9 2,037,130 - Ga0059261_1928 0.67 -1.1 2,037,130 - Ga0059261_1928 0.67 -0.4 2,037,130 - Ga0059261_1928 0.67 +0.1 2,037,576 - Ga0059261_1929 0.19 +0.1 2,037,576 - Ga0059261_1929 0.19 -2.5 2,037,779 + Ga0059261_1929 0.44 -0.7 2,037,779 + Ga0059261_1929 0.44 -0.9 2,037,780 - Ga0059261_1929 0.44 -1.8 2,037,780 - Ga0059261_1929 0.44 -0.8 2,037,780 - Ga0059261_1929 0.44 -2.1 2,037,780 - Ga0059261_1929 0.44 -0.4 2,037,780 - Ga0059261_1929 0.44 -0.0 2,037,780 - Ga0059261_1929 0.44 -1.2 2,037,780 - +0.7 2,037,839 + Ga0059261_1929 0.51 -1.6 2,037,839 + Ga0059261_1929 0.51 -0.9 2,037,839 + Ga0059261_1929 0.51 -0.6 2,037,840 - Ga0059261_1929 0.51 -1.3 2,037,840 - Ga0059261_1929 0.51 +0.1 2,037,950 + Ga0059261_1929 0.65 +0.1 2,037,950 + Ga0059261_1929 0.65 -1.4 2,037,953 + Ga0059261_1929 0.65 +0.7 2,037,953 + Ga0059261_1929 0.65 -0.4 2,037,953 + Ga0059261_1929 0.65 -2.2 2,037,954 - Ga0059261_1929 0.65 -1.4 2,037,954 - Ga0059261_1929 0.65 +1.7 2,038,092 + Ga0059261_1929 0.82 -1.6 2,038,166 + -2.0 2,038,166 + -0.7 2,038,235 + -0.0 2,038,257 + +0.3 2,038,257 + -0.1 2,038,257 + +0.3 2,038,258 - +1.5 2,038,273 + -0.3 2,038,273 + +0.1 2,038,273 + -0.9 2,038,273 + -0.3 2,038,274 - +0.9 2,038,387 + +0.0
Or see this region's nucleotide sequence