Experiment: Bacitracin 0.12 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_1079 and Ga0059261_1080 are separated by 3 nucleotides Ga0059261_1080 and Ga0059261_1081 are separated by 36 nucleotides
Ga0059261_1079: Ga0059261_1079 - Chemotaxis protein histidine kinase and related kinases, at 1,106,225 to 1,108,204
_1079
Ga0059261_1080: Ga0059261_1080 - Chemotaxis signal transduction protein, at 1,108,208 to 1,108,729
_1080
Ga0059261_1081: Ga0059261_1081 - Methyl-accepting chemotaxis protein, at 1,108,766 to 1,110,565
_1081
Position (kb)
1108
1109 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1107.320 kb on - strand, within Ga0059261_1079 at 1107.320 kb on - strand, within Ga0059261_1079 at 1107.339 kb on + strand, within Ga0059261_1079 at 1107.340 kb on - strand, within Ga0059261_1079 at 1107.340 kb on - strand, within Ga0059261_1079 at 1107.815 kb on + strand, within Ga0059261_1079 at 1107.815 kb on + strand, within Ga0059261_1079 at 1107.816 kb on - strand, within Ga0059261_1079 at 1107.816 kb on - strand, within Ga0059261_1079 at 1107.816 kb on - strand, within Ga0059261_1079 at 1107.816 kb on - strand, within Ga0059261_1079 at 1107.816 kb on - strand, within Ga0059261_1079 at 1107.855 kb on + strand, within Ga0059261_1079 at 1107.856 kb on - strand, within Ga0059261_1079 at 1107.861 kb on + strand, within Ga0059261_1079 at 1107.862 kb on - strand, within Ga0059261_1079 at 1108.219 kb on + strand at 1108.219 kb on + strand at 1108.219 kb on + strand at 1108.219 kb on + strand at 1108.220 kb on - strand at 1108.220 kb on - strand at 1108.220 kb on - strand at 1108.220 kb on - strand at 1108.442 kb on - strand, within Ga0059261_1080 at 1108.442 kb on - strand, within Ga0059261_1080 at 1108.607 kb on + strand, within Ga0059261_1080 at 1108.607 kb on + strand, within Ga0059261_1080 at 1108.608 kb on - strand, within Ga0059261_1080 at 1108.608 kb on - strand, within Ga0059261_1080 at 1108.779 kb on + strand at 1108.780 kb on - strand at 1108.957 kb on + strand, within Ga0059261_1081 at 1108.957 kb on + strand, within Ga0059261_1081 at 1108.957 kb on + strand, within Ga0059261_1081 at 1108.958 kb on - strand, within Ga0059261_1081 at 1108.958 kb on - strand, within Ga0059261_1081 at 1108.958 kb on - strand, within Ga0059261_1081 at 1109.126 kb on + strand, within Ga0059261_1081 at 1109.126 kb on + strand, within Ga0059261_1081 at 1109.126 kb on + strand, within Ga0059261_1081 at 1109.126 kb on + strand, within Ga0059261_1081 at 1109.126 kb on + strand, within Ga0059261_1081 at 1109.127 kb on - strand, within Ga0059261_1081 at 1109.127 kb on - strand, within Ga0059261_1081 at 1109.127 kb on - strand, within Ga0059261_1081 at 1109.127 kb on - strand, within Ga0059261_1081 at 1109.127 kb on - strand, within Ga0059261_1081 at 1109.296 kb on + strand, within Ga0059261_1081 at 1109.296 kb on + strand, within Ga0059261_1081 at 1109.296 kb on + strand at 1109.296 kb on + strand, within Ga0059261_1081 at 1109.296 kb on + strand, within Ga0059261_1081 at 1109.297 kb on - strand, within Ga0059261_1081 at 1109.297 kb on - strand, within Ga0059261_1081 at 1109.306 kb on + strand, within Ga0059261_1081 at 1109.306 kb on + strand, within Ga0059261_1081 at 1109.306 kb on + strand, within Ga0059261_1081 at 1109.306 kb on + strand, within Ga0059261_1081 at 1109.307 kb on - strand, within Ga0059261_1081 at 1109.307 kb on - strand, within Ga0059261_1081 at 1109.504 kb on - strand, within Ga0059261_1081 at 1109.611 kb on - strand, within Ga0059261_1081 at 1109.611 kb on - strand, within Ga0059261_1081 at 1109.611 kb on - strand, within Ga0059261_1081 at 1109.611 kb on - strand, within Ga0059261_1081 at 1109.611 kb on - strand, within Ga0059261_1081 at 1109.611 kb on - strand, within Ga0059261_1081
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.12 mg/ml remove 1,107,320 - Ga0059261_1079 0.55 -1.0 1,107,320 - Ga0059261_1079 0.55 +0.0 1,107,339 + Ga0059261_1079 0.56 +0.5 1,107,340 - Ga0059261_1079 0.56 -1.1 1,107,340 - Ga0059261_1079 0.56 -0.3 1,107,815 + Ga0059261_1079 0.80 -0.7 1,107,815 + Ga0059261_1079 0.80 -0.3 1,107,816 - Ga0059261_1079 0.80 -0.2 1,107,816 - Ga0059261_1079 0.80 +0.3 1,107,816 - Ga0059261_1079 0.80 +0.3 1,107,816 - Ga0059261_1079 0.80 +0.2 1,107,816 - Ga0059261_1079 0.80 +0.9 1,107,855 + Ga0059261_1079 0.82 -0.2 1,107,856 - Ga0059261_1079 0.82 -0.1 1,107,861 + Ga0059261_1079 0.83 -1.2 1,107,862 - Ga0059261_1079 0.83 +0.0 1,108,219 + +0.2 1,108,219 + -0.2 1,108,219 + +0.2 1,108,219 + -1.3 1,108,220 - +0.3 1,108,220 - +0.8 1,108,220 - -0.2 1,108,220 - +1.2 1,108,442 - Ga0059261_1080 0.45 -0.4 1,108,442 - Ga0059261_1080 0.45 -0.6 1,108,607 + Ga0059261_1080 0.76 +0.1 1,108,607 + Ga0059261_1080 0.76 +0.0 1,108,608 - Ga0059261_1080 0.77 -1.5 1,108,608 - Ga0059261_1080 0.77 -1.5 1,108,779 + -0.4 1,108,780 - -1.5 1,108,957 + Ga0059261_1081 0.11 -0.2 1,108,957 + Ga0059261_1081 0.11 +0.7 1,108,957 + Ga0059261_1081 0.11 -0.1 1,108,958 - Ga0059261_1081 0.11 -0.8 1,108,958 - Ga0059261_1081 0.11 -0.1 1,108,958 - Ga0059261_1081 0.11 -0.3 1,109,126 + Ga0059261_1081 0.20 +0.3 1,109,126 + Ga0059261_1081 0.20 +0.5 1,109,126 + Ga0059261_1081 0.20 +0.1 1,109,126 + Ga0059261_1081 0.20 +0.1 1,109,126 + Ga0059261_1081 0.20 +0.3 1,109,127 - Ga0059261_1081 0.20 -0.2 1,109,127 - Ga0059261_1081 0.20 -0.2 1,109,127 - Ga0059261_1081 0.20 -0.4 1,109,127 - Ga0059261_1081 0.20 +0.5 1,109,127 - Ga0059261_1081 0.20 +0.3 1,109,296 + Ga0059261_1081 0.29 -0.1 1,109,296 + Ga0059261_1081 0.29 +1.1 1,109,296 + -0.7 1,109,296 + Ga0059261_1081 0.29 -0.2 1,109,296 + Ga0059261_1081 0.29 -3.1 1,109,297 - Ga0059261_1081 0.29 +0.2 1,109,297 - Ga0059261_1081 0.29 -0.6 1,109,306 + Ga0059261_1081 0.30 +0.2 1,109,306 + Ga0059261_1081 0.30 +0.4 1,109,306 + Ga0059261_1081 0.30 -0.3 1,109,306 + Ga0059261_1081 0.30 +0.3 1,109,307 - Ga0059261_1081 0.30 -0.9 1,109,307 - Ga0059261_1081 0.30 -0.6 1,109,504 - Ga0059261_1081 0.41 -0.0 1,109,611 - Ga0059261_1081 0.47 -0.4 1,109,611 - Ga0059261_1081 0.47 +0.9 1,109,611 - Ga0059261_1081 0.47 +0.2 1,109,611 - Ga0059261_1081 0.47 -0.3 1,109,611 - Ga0059261_1081 0.47 -0.5 1,109,611 - Ga0059261_1081 0.47 -0.3
Or see this region's nucleotide sequence