Experiment: Adenosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1384 and Dshi_1385 are separated by 238 nucleotides Dshi_1385 and Dshi_1386 are separated by 3 nucleotides
Dshi_1384: Dshi_1384 - permease protein of ABC transporter (RefSeq), at 1,437,354 to 1,438,355
_1384
Dshi_1385: Dshi_1385 - Endoribonuclease L-PSP (RefSeq), at 1,438,594 to 1,438,992
_1385
Dshi_1386: Dshi_1386 - hypothetical protein (RefSeq), at 1,438,996 to 1,440,408
_1386
Position (kb)
1438
1439 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1437.654 kb on + strand, within Dshi_1384 at 1437.679 kb on + strand, within Dshi_1384 at 1437.686 kb on - strand, within Dshi_1384 at 1437.729 kb on - strand, within Dshi_1384 at 1437.778 kb on + strand, within Dshi_1384 at 1437.786 kb on - strand, within Dshi_1384 at 1437.812 kb on + strand, within Dshi_1384 at 1437.812 kb on + strand, within Dshi_1384 at 1437.973 kb on + strand, within Dshi_1384 at 1438.234 kb on - strand, within Dshi_1384 at 1438.258 kb on - strand at 1438.298 kb on + strand at 1438.488 kb on + strand at 1438.511 kb on - strand at 1438.532 kb on - strand at 1438.537 kb on - strand at 1438.605 kb on + strand at 1438.645 kb on + strand, within Dshi_1385 at 1438.696 kb on - strand, within Dshi_1385 at 1438.723 kb on + strand, within Dshi_1385 at 1438.941 kb on - strand, within Dshi_1385 at 1438.999 kb on + strand at 1439.338 kb on - strand, within Dshi_1386 at 1439.461 kb on - strand, within Dshi_1386 at 1439.539 kb on - strand, within Dshi_1386 at 1439.615 kb on - strand, within Dshi_1386 at 1439.626 kb on - strand, within Dshi_1386 at 1439.801 kb on - strand, within Dshi_1386 at 1439.895 kb on + strand, within Dshi_1386 at 1439.902 kb on + strand, within Dshi_1386 at 1439.918 kb on + strand, within Dshi_1386 at 1439.951 kb on + strand, within Dshi_1386
Per-strain Table
Position Strand Gene LocusTag Fraction Adenosine (N) remove 1,437,654 + Dshi_1384 0.30 -0.7 1,437,679 + Dshi_1384 0.32 +0.3 1,437,686 - Dshi_1384 0.33 +0.0 1,437,729 - Dshi_1384 0.37 +0.2 1,437,778 + Dshi_1384 0.42 -0.6 1,437,786 - Dshi_1384 0.43 -0.7 1,437,812 + Dshi_1384 0.46 +0.2 1,437,812 + Dshi_1384 0.46 -0.9 1,437,973 + Dshi_1384 0.62 +0.3 1,438,234 - Dshi_1384 0.88 +0.7 1,438,258 - +0.2 1,438,298 + -0.1 1,438,488 + +1.3 1,438,511 - -0.3 1,438,532 - -0.0 1,438,537 - -0.1 1,438,605 + -2.8 1,438,645 + Dshi_1385 0.13 +1.5 1,438,696 - Dshi_1385 0.26 +0.2 1,438,723 + Dshi_1385 0.32 +1.7 1,438,941 - Dshi_1385 0.87 +0.7 1,438,999 + +0.6 1,439,338 - Dshi_1386 0.24 -0.5 1,439,461 - Dshi_1386 0.33 -1.3 1,439,539 - Dshi_1386 0.38 +0.6 1,439,615 - Dshi_1386 0.44 +0.5 1,439,626 - Dshi_1386 0.45 -0.4 1,439,801 - Dshi_1386 0.57 -0.2 1,439,895 + Dshi_1386 0.64 +0.6 1,439,902 + Dshi_1386 0.64 -0.4 1,439,918 + Dshi_1386 0.65 +0.1 1,439,951 + Dshi_1386 0.68 -0.2
Or see this region's nucleotide sequence