Experiment: Phosphomycin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_4022 and Ga0059261_4023 overlap by 4 nucleotides Ga0059261_4023 and Ga0059261_4024 overlap by 28 nucleotides Ga0059261_4024 and Ga0059261_4025 overlap by 4 nucleotides Ga0059261_4025 and Ga0059261_4026 overlap by 8 nucleotides
Ga0059261_4022: Ga0059261_4022 - Signal transduction histidine kinase, at 4,139,490 to 4,141,757
_4022
Ga0059261_4023: Ga0059261_4023 - tRNA threonylcarbamoyl adenosine modification protein YjeE, at 4,141,754 to 4,142,200
_4023
Ga0059261_4024: Ga0059261_4024 - Predicted phosphotransferase related to Ser/Thr protein kinases, at 4,142,173 to 4,143,165
_4024
Ga0059261_4025: Ga0059261_4025 - Nucleotidyl transferase, at 4,143,162 to 4,143,923
_4025
Ga0059261_4026: Ga0059261_4026 - double-strand break repair protein AddB, alphaproteobacterial type, at 4,143,916 to 4,146,861
_4026
Position (kb)
4142
4143
4144 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 4141.179 kb on + strand, within Ga0059261_4022 at 4141.214 kb on + strand, within Ga0059261_4022 at 4141.511 kb on + strand, within Ga0059261_4022 at 4141.751 kb on + strand at 4141.751 kb on + strand at 4142.221 kb on + strand at 4142.422 kb on + strand, within Ga0059261_4024 at 4142.524 kb on + strand, within Ga0059261_4024 at 4142.524 kb on + strand, within Ga0059261_4024 at 4142.524 kb on + strand, within Ga0059261_4024 at 4142.524 kb on + strand, within Ga0059261_4024 at 4142.524 kb on + strand, within Ga0059261_4024 at 4142.524 kb on + strand, within Ga0059261_4024 at 4142.524 kb on + strand, within Ga0059261_4024 at 4142.602 kb on + strand, within Ga0059261_4024 at 4142.602 kb on + strand, within Ga0059261_4024 at 4142.602 kb on + strand, within Ga0059261_4024 at 4142.635 kb on + strand, within Ga0059261_4024 at 4142.674 kb on + strand, within Ga0059261_4024 at 4142.743 kb on + strand, within Ga0059261_4024 at 4142.743 kb on + strand, within Ga0059261_4024 at 4142.830 kb on + strand, within Ga0059261_4024 at 4142.830 kb on + strand, within Ga0059261_4024 at 4142.947 kb on + strand, within Ga0059261_4024 at 4142.947 kb on + strand, within Ga0059261_4024 at 4143.058 kb on + strand, within Ga0059261_4024 at 4143.059 kb on - strand, within Ga0059261_4024 at 4143.120 kb on + strand at 4143.120 kb on + strand at 4143.378 kb on + strand, within Ga0059261_4025 at 4143.378 kb on + strand, within Ga0059261_4025 at 4143.378 kb on + strand, within Ga0059261_4025 at 4143.837 kb on + strand, within Ga0059261_4025 at 4143.943 kb on + strand at 4143.943 kb on + strand at 4143.943 kb on + strand at 4143.943 kb on + strand at 4143.943 kb on + strand at 4143.943 kb on + strand at 4143.943 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.005 mg/ml remove 4,141,179 + Ga0059261_4022 0.74 -0.2 4,141,214 + Ga0059261_4022 0.76 -0.2 4,141,511 + Ga0059261_4022 0.89 -0.3 4,141,751 + +0.2 4,141,751 + -0.4 4,142,221 + -1.9 4,142,422 + Ga0059261_4024 0.25 -2.5 4,142,524 + Ga0059261_4024 0.35 -2.9 4,142,524 + Ga0059261_4024 0.35 -1.2 4,142,524 + Ga0059261_4024 0.35 -3.6 4,142,524 + Ga0059261_4024 0.35 -2.4 4,142,524 + Ga0059261_4024 0.35 -1.5 4,142,524 + Ga0059261_4024 0.35 -2.2 4,142,524 + Ga0059261_4024 0.35 -2.8 4,142,602 + Ga0059261_4024 0.43 -4.8 4,142,602 + Ga0059261_4024 0.43 -1.7 4,142,602 + Ga0059261_4024 0.43 -4.4 4,142,635 + Ga0059261_4024 0.47 -3.2 4,142,674 + Ga0059261_4024 0.50 -2.8 4,142,743 + Ga0059261_4024 0.57 -2.0 4,142,743 + Ga0059261_4024 0.57 -1.9 4,142,830 + Ga0059261_4024 0.66 -3.2 4,142,830 + Ga0059261_4024 0.66 -1.6 4,142,947 + Ga0059261_4024 0.78 -2.3 4,142,947 + Ga0059261_4024 0.78 -0.5 4,143,058 + Ga0059261_4024 0.89 -3.0 4,143,059 - Ga0059261_4024 0.89 -1.0 4,143,120 + -2.0 4,143,120 + -1.0 4,143,378 + Ga0059261_4025 0.28 -2.8 4,143,378 + Ga0059261_4025 0.28 -3.1 4,143,378 + Ga0059261_4025 0.28 -1.0 4,143,837 + Ga0059261_4025 0.89 -3.0 4,143,943 + -0.2 4,143,943 + +1.6 4,143,943 + -0.0 4,143,943 + -0.1 4,143,943 + -0.4 4,143,943 + -0.3 4,143,943 + -0.3
Or see this region's nucleotide sequence