Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2522

Experiment: MoYLS4 with 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with 5-Hydroxymethylfurfural 5 mM
3,178,940	+	flgI	DvMF_2521	0.30	-2.0
3,178,944	-	flgI	DvMF_2521	0.31	-2.1
3,179,028	+	flgI	DvMF_2521	0.38	-1.9
3,179,028	+	flgI	DvMF_2521	0.38	-2.1
3,179,094	+	flgI	DvMF_2521	0.44	-2.4
3,179,165	+	flgI	DvMF_2521	0.50	-2.0
3,179,173	-	flgI	DvMF_2521	0.51	-1.7
3,179,467	+	flgI	DvMF_2521	0.77	-2.2
3,179,902	-				+0.6
3,179,915	+				-0.5
3,179,991	-				-1.9
3,180,057	-				-0.9
3,180,121	-		DvMF_2522	0.10	-2.4
3,180,173	+		DvMF_2522	0.13	-2.3
3,180,184	+		DvMF_2522	0.14	-2.0
3,180,624	+		DvMF_2522	0.38	-0.4
3,180,851	-		DvMF_2522	0.51	-0.5
3,180,851	-		DvMF_2522	0.51	-0.9
3,180,851	-		DvMF_2522	0.51	-1.7
3,181,045	-		DvMF_2522	0.61	-0.8
3,181,319	+		DvMF_2522	0.76	-0.4
3,181,464	-		DvMF_2522	0.84	-0.7
3,181,507	+		DvMF_2522	0.87	-1.4
3,181,555	+		DvMF_2522	0.89	-0.7
3,181,645	+				-0.3
3,181,752	+				-1.2
3,181,803	-		DvMF_2523	0.11	-2.3
3,181,919	+		DvMF_2523	0.36	-2.5
3,182,027	+		DvMF_2523	0.59	-3.8
3,182,040	-		DvMF_2523	0.62	-3.0
3,182,373	-				-5.2
3,182,393	-				-1.8
3,182,472	+		DvMF_2524	0.12	-2.9
3,182,480	+		DvMF_2524	0.12	-2.7
3,182,672	+		DvMF_2524	0.22	-2.4