Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2026

Experiment: MoYLS4 with 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with 5-Hydroxymethylfurfural 5 mM
2,509,932	+				-0.6
2,510,042	+				-0.3
2,510,050	-				-0.4
2,510,108	-				-0.0
2,510,262	-				+0.1
2,510,351	-				-0.3
2,510,377	-				-1.1
2,510,447	-				+0.5
2,510,511	+				+0.7
2,510,527	+				+0.0
2,510,623	+		DvMF_2026	0.13	-0.2
2,510,633	+		DvMF_2026	0.14	-1.2
2,510,687	+		DvMF_2026	0.18	+0.2
2,510,767	+		DvMF_2026	0.24	-0.2
2,510,771	+		DvMF_2026	0.24	-0.8
2,510,809	+		DvMF_2026	0.27	-0.0
2,510,838	-		DvMF_2026	0.29	-0.4
2,510,885	+		DvMF_2026	0.32	+0.3
2,510,972	+		DvMF_2026	0.39	-0.1
2,511,173	-		DvMF_2026	0.54	-0.0
2,511,275	+		DvMF_2026	0.61	+0.7
2,511,321	+		DvMF_2026	0.65	-0.4
2,511,538	+		DvMF_2026	0.81	-0.4
2,511,586	+		DvMF_2026	0.84	-0.2
2,511,680	-				-0.2
2,511,725	+				-1.1
2,511,796	-				-1.2
2,511,823	-				-0.7
2,511,905	+				-0.2
2,511,913	-				-0.3
2,511,913	-				-0.3
2,512,023	-				-0.6
2,512,438	+		DvMF_2027	0.44	-0.1
2,512,565	+		DvMF_2027	0.57	+0.2
2,512,741	-		DvMF_2027	0.75	-0.4