Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2018

Experiment: MoYLS4 with 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with 5-Hydroxymethylfurfural 5 mM
2,498,513	+		DvMF_2017	0.58	-0.4
2,498,692	+		DvMF_2017	0.66	-0.5
2,498,700	-		DvMF_2017	0.66	-1.2
2,498,913	-		DvMF_2017	0.76	-0.5
2,498,934	-		DvMF_2017	0.77	-0.8
2,498,942	+		DvMF_2017	0.77	-0.3
2,498,942	+		DvMF_2017	0.77	-0.6
2,498,942	+		DvMF_2017	0.77	-0.1
2,499,118	+		DvMF_2017	0.85	-1.0
2,499,502	+				-0.7
2,499,745	-		DvMF_2018	0.27	-0.3
2,499,962	+		DvMF_2018	0.46	-0.1
2,500,050	-		DvMF_2018	0.53	-0.8
2,500,050	-		DvMF_2018	0.53	-0.3
2,500,050	-		DvMF_2018	0.53	-0.5
2,500,196	+		DvMF_2018	0.66	-0.4
2,500,366	+		DvMF_2018	0.80	-0.8
2,500,396	-		DvMF_2018	0.83	-0.1
2,500,424	+		DvMF_2018	0.85	-0.4
2,500,683	-				+0.3
2,500,769	+				-0.0
2,501,028	-		DvMF_2019	0.16	+0.4
2,501,105	+		DvMF_2019	0.23	-0.7
2,501,113	-		DvMF_2019	0.24	-0.1
2,501,113	-		DvMF_2019	0.24	-0.6
2,501,178	-		DvMF_2019	0.30	-0.7
2,501,206	-		DvMF_2019	0.32	-0.6
2,501,207	+		DvMF_2019	0.33	-0.4
2,501,456	-		DvMF_2019	0.56	+0.6
2,501,501	+		DvMF_2019	0.60	-0.0
2,501,544	+		DvMF_2019	0.64	-0.6
2,501,544	+		DvMF_2019	0.64	-0.4