Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2012
Experiment: MoYLS4 with 5-Hydroxymethylfurfural 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with 5-Hydroxymethylfurfural 5 mM |
---|---|---|---|---|---|
remove | |||||
2,489,970 | - | -0.9 | |||
2,490,560 | + | DvMF_2011 | 0.72 | -2.6 | |
2,490,657 | + | DvMF_2011 | 0.84 | -1.1 | |
2,491,654 | + | -0.6 | |||
2,491,662 | - | -0.3 | |||
2,491,790 | - | DvMF_2013 | 0.11 | -0.5 | |
2,492,219 | + | DvMF_2013 | 0.45 | -1.3 | |
2,492,265 | + | DvMF_2013 | 0.48 | -0.8 | |
2,492,331 | - | DvMF_2013 | 0.54 | -0.9 | |
2,492,537 | - | DvMF_2013 | 0.70 | -1.1 |
Or see this region's nucleotide sequence