Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0989

Experiment: MoYLS4 with 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with 5-Hydroxymethylfurfural 5 mM
1,201,365	+		DvMF_0988	0.70	-0.6
1,201,370	+		DvMF_0988	0.71	-0.4
1,201,433	+		DvMF_0988	0.75	-0.7
1,201,441	-		DvMF_0988	0.75	-0.5
1,201,521	-		DvMF_0988	0.80	-0.9
1,201,565	+		DvMF_0988	0.83	-0.8
1,202,068	+				-0.3
1,202,076	-				-2.1
1,202,140	-				-0.6
1,202,176	+		DvMF_0989	0.12	-1.7
1,202,176	+		DvMF_0989	0.12	-1.3
1,202,260	+		DvMF_0989	0.22	-0.6
1,202,356	+		DvMF_0989	0.33	-1.1
1,202,361	+		DvMF_0989	0.33	-2.1
1,202,548	-		DvMF_0989	0.54	-0.4
1,202,551	-		DvMF_0989	0.55	-1.4
1,202,707	+		DvMF_0989	0.72	-2.5
1,202,707	+		DvMF_0989	0.72	-1.2
1,203,077	-				-1.3
1,203,085	-				-0.9
1,203,152	+				+0.2
1,203,258	-				-0.0
1,203,512	+		DvMF_0990	0.23	-0.3
1,203,554	-		DvMF_0990	0.27	-1.4
1,203,554	-		DvMF_0990	0.27	-0.9
1,203,554	-		DvMF_0990	0.27	-1.2
1,203,556	+		DvMF_0990	0.27	-0.5
1,203,556	+		DvMF_0990	0.27	-0.9
1,203,596	+		DvMF_0990	0.30	-1.1
1,203,626	+		DvMF_0990	0.33	-0.9
1,203,634	-		DvMF_0990	0.34	-1.0
1,203,851	+		DvMF_0990	0.52	-1.7
1,203,852	+		DvMF_0990	0.52	-1.1