Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0612
Experiment: MoYLS4 with 5-Hydroxymethylfurfural 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with 5-Hydroxymethylfurfural 5 mM |
---|---|---|---|---|---|
remove | |||||
724,298 | + | DvMF_0611 | 0.28 | -0.4 | |
724,375 | + | DvMF_0611 | 0.39 | -0.1 | |
724,566 | - | DvMF_0611 | 0.66 | -0.3 | |
724,812 | - | -0.3 | |||
724,975 | - | -0.0 | |||
725,019 | - | -0.5 | |||
725,051 | + | +1.0 | |||
725,061 | - | +0.6 | |||
725,063 | + | -1.7 | |||
725,085 | + | +1.0 | |||
725,784 | + | proA | DvMF_0612 | 0.38 | -1.2 |
725,857 | - | proA | DvMF_0612 | 0.44 | -1.2 |
726,058 | - | proA | DvMF_0612 | 0.59 | -1.6 |
726,351 | + | proA | DvMF_0612 | 0.81 | -1.4 |
726,359 | - | proA | DvMF_0612 | 0.82 | -2.7 |
726,504 | + | -0.8 | |||
727,515 | - | DvMF_0613 | 0.89 | -0.1 |
Or see this region's nucleotide sequence