Strain Fitness in Shewanella loihica PV-4 around Shew_3541

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,229,188	-				+0.1
4,229,199	-				-0.0
4,229,199	-				-0.1
4,229,326	+				+0.3
4,229,334	-				+0.7
4,229,334	-				+0.8
4,229,334	-				+0.4
4,229,334	-				+1.0
4,229,361	+				+0.4
4,229,383	+		Shew_3540	0.11	+0.4
4,229,397	+		Shew_3540	0.14	+0.0
4,229,448	-		Shew_3540	0.23	+0.2
4,229,530	+		Shew_3540	0.37	+0.2
4,229,729	-		Shew_3540	0.73	+0.2
4,229,753	+		Shew_3540	0.77	-1.1
4,229,759	+		Shew_3540	0.78	-0.9
4,229,826	+				+0.0
4,229,836	+				+0.2
4,229,844	-				+0.2
4,230,236	+		Shew_3541	0.44	-0.1
4,230,254	+		Shew_3541	0.48	-1.0
4,230,334	+		Shew_3541	0.65	+0.0
4,230,752	-		Shew_3542	0.57	+0.3
4,230,795	+		Shew_3542	0.67	+0.1
4,230,902	+				+0.1
4,231,145	+		Shew_3543	0.31	+0.5
4,231,223	+		Shew_3543	0.45	+0.4
4,231,231	-		Shew_3543	0.46	+0.4
4,231,231	-		Shew_3543	0.46	+1.0
4,231,231	-		Shew_3543	0.46	-0.3
4,231,317	-		Shew_3543	0.62	-0.3
4,231,447	+		Shew_3543	0.85	+0.2