Strain Fitness in Shewanella loihica PV-4 around Shew_3147

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,741,320	-				+0.0
3,741,338	+				+0.1
3,741,348	+				-0.6
3,741,360	+				+0.3
3,741,384	-				+0.3
3,741,403	-				-0.1
3,741,403	-				+0.4
3,741,430	-				-0.1
3,741,430	-				-0.2
3,741,434	+				+0.0
3,741,434	-				+0.4
3,741,439	+				+0.2
3,741,439	+				+0.1
3,741,439	+				+0.3
3,741,439	+				+0.1
3,741,439	+				+0.7
3,741,439	+				+0.1
3,741,439	+				+0.4
3,741,439	+				+0.0
3,741,439	+				+0.7
3,741,439	+				+0.0
3,741,439	+				+0.1
3,741,441	-				+0.1
3,741,446	+				-0.3
3,741,446	+				+0.5
3,741,446	+				+0.0
3,741,446	+				+0.2
3,741,446	+				+0.3
3,741,446	+				+0.1
3,741,446	+				+0.3
3,741,446	+				-0.0
3,741,446	+				-0.4
3,741,446	+				+0.7
3,741,446	+				-0.1
3,741,446	+				-0.1
3,741,446	+				+0.3
3,741,446	+				+0.1
3,741,446	+				-0.3
3,741,446	+				+0.1
3,741,447	-				+0.1
3,741,447	-				+0.1
3,741,447	-				+0.2
3,741,447	-				-0.8
3,741,447	-				-0.1
3,741,454	-				+0.1
3,741,454	-				+0.1
3,741,454	-				-0.3
3,741,454	-				+0.8
3,741,454	-				-0.3
3,741,454	-				-0.6
3,741,454	-				-0.0
3,741,454	-				+0.0
3,741,456	+				+1.4
3,741,469	+				-0.2
3,741,478	+				+0.3
3,741,478	+				+0.4
3,741,478	+				+0.6
3,741,486	-				+0.1
3,741,531	-				+2.1
3,741,555	+				+0.2
3,741,568	-				+0.4
3,741,570	+				+0.0
3,741,571	+				+1.3
3,741,573	-				+0.0
3,741,578	-				-0.1
3,741,596	+				+0.6
3,741,602	-				-0.4
3,741,613	-				+0.3
3,741,650	+				-0.3
3,741,652	-				-0.3
3,741,652	-				+0.3
3,741,658	-				-0.3
3,741,658	-				+0.2
3,741,658	-				+0.2
3,741,685	-				+0.1
3,741,707	+				+0.4
3,741,715	-				+0.2
3,741,715	-				+0.4
3,741,717	+				+0.3
3,741,717	+				+0.0
3,741,725	-				+0.2
3,741,725	-				+0.0
3,741,726	-				+0.0
3,741,732	+				+0.7
3,741,732	+				-0.1
3,741,732	+				+0.3
3,741,740	-				-0.0
3,741,758	-				+0.2
3,741,792	+				+0.1
3,741,792	+				+0.0
3,741,800	-				+0.3
3,741,807	+				+0.1
3,741,815	-				-0.2
3,741,851	+				+0.3
3,741,917	+				+0.8
3,741,931	+				-0.3
3,741,934	+				+0.2
3,741,937	-				+0.2
3,741,937	-				+0.1
3,741,942	-				+0.5
3,741,968	+				+0.8
3,741,976	-				-0.4
3,741,976	-				+0.6
3,741,976	-				+0.3
3,741,976	-				-0.3
3,742,008	+				+0.7
3,742,164	+				+0.2
3,742,207	+				+0.3
3,742,207	+				-0.2
3,742,214	+				+0.4
3,742,214	+				+0.1
3,742,215	-				-0.0
3,742,217	-				+0.2
3,742,222	-				-0.0
3,742,222	-				+0.2
3,742,222	-				-0.6
3,742,222	-				+0.4
3,742,222	-				+0.2
3,742,225	+				+0.2
3,742,241	+				+0.5
3,742,244	-				-0.3
3,742,257	+				+0.1
3,742,257	+				+0.2
3,742,258	+				+0.4
3,742,258	+				+0.2
3,742,258	+				+0.3
3,742,258	+				+0.1
3,742,265	-				+0.4
3,742,265	-				+0.2
3,742,266	-				-0.4
3,742,266	-				-0.4
3,742,266	-				+0.2
3,742,277	-				+0.3
3,742,302	+				+0.0
3,742,302	+				+0.1
3,742,316	+				+0.3
3,742,406	+		Shew_3147	0.16	+0.3
3,742,413	-		Shew_3147	0.17	+0.9
3,742,438	-		Shew_3147	0.21	+1.0
3,742,442	+		Shew_3147	0.22	+0.3
3,742,442	+		Shew_3147	0.22	+0.1
3,742,450	-		Shew_3147	0.23	+0.5
3,742,450	-		Shew_3147	0.23	+0.1
3,742,450	-		Shew_3147	0.23	-0.2
3,742,450	-		Shew_3147	0.23	+0.0
3,742,450	-		Shew_3147	0.23	+0.7
3,742,461	+		Shew_3147	0.25	+0.1
3,742,469	-		Shew_3147	0.27	+0.1
3,742,485	+		Shew_3147	0.29	-0.0
3,742,485	+		Shew_3147	0.29	+0.0
3,742,493	-		Shew_3147	0.31	+0.1
3,742,493	-		Shew_3147	0.31	+0.3
3,742,508	-		Shew_3147	0.33	+0.0
3,742,508	-		Shew_3147	0.33	+0.1
3,742,508	-		Shew_3147	0.33	+0.1
3,742,515	-		Shew_3147	0.35	+0.3
3,742,515	-		Shew_3147	0.35	+0.3
3,742,517	+		Shew_3147	0.35	+0.4
3,742,550	+		Shew_3147	0.41	+0.3
3,742,565	+		Shew_3147	0.43	+0.6
3,742,565	+		Shew_3147	0.43	+0.5
3,742,570	+		Shew_3147	0.44	+0.2
3,742,578	-		Shew_3147	0.46	+0.1
3,742,651	+		Shew_3147	0.58	+0.3
3,742,663	+		Shew_3147	0.60	+0.2
3,742,663	+		Shew_3147	0.60	+0.4
3,742,708	-		Shew_3147	0.68	+0.2
3,742,732	-		Shew_3147	0.72	-0.1
3,742,742	+		Shew_3147	0.74	+0.1
3,742,838	+				+0.6
3,742,867	-				-0.1
3,742,914	+				+0.1
3,742,914	+				+0.1
3,742,914	+				+0.2
3,742,914	+				+0.7
3,742,950	-				-0.5
3,742,950	-				+0.0
3,742,967	+				+0.3
3,742,982	+				+0.4
3,743,068	+				-0.2
3,743,068	+				+0.0
3,743,068	+				-0.5
3,743,071	-				+0.1
3,743,076	-				+0.4
3,743,076	-				+0.3
3,743,076	-				-0.0
3,743,076	-				+0.2
3,743,101	+				+0.2
3,743,101	+				-0.0
3,743,260	-				-0.7
3,743,261	+				-0.2
3,743,277	-				+0.3
3,743,293	-				+0.2
3,743,336	-				+0.2
3,743,385	-				+0.3
3,743,860	-		Shew_3148	0.17	-0.7