Strain Fitness in Shewanella loihica PV-4 around Shew_2340
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | LB |
|---|---|---|---|---|---|
| remove | |||||
| 2,733,331 | + | -0.1 | |||
| 2,733,473 | + | Shew_2339 | 0.26 | -0.2 | |
| 2,733,492 | + | Shew_2339 | 0.30 | +0.3 | |
| 2,733,500 | - | Shew_2339 | 0.31 | +0.0 | |
| 2,733,500 | - | Shew_2339 | 0.31 | -0.2 | |
| 2,733,515 | - | Shew_2339 | 0.34 | +0.2 | |
| 2,734,072 | - | Shew_2340 | 0.19 | -0.6 | |
| 2,734,072 | - | Shew_2340 | 0.19 | -0.3 | |
| 2,734,129 | - | Shew_2340 | 0.30 | +0.1 | |
| 2,734,162 | - | Shew_2340 | 0.37 | -0.6 | |
| 2,734,890 | - | Shew_2341 | 0.25 | -0.0 |
Or see this region's nucleotide sequence