Experiment: L-Histidine
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS21555 and HSERO_RS21560 overlap by 23 nucleotides HSERO_RS21560 and HSERO_RS21565 are separated by 378 nucleotides
HSERO_RS21555: HSERO_RS21555 - 3-phosphoglycerate dehydrogenase, at 4,933,177 to 4,934,163
_RS21555
HSERO_RS21560: HSERO_RS21560 - L-asparaginase, at 4,934,141 to 4,934,905
_RS21560
HSERO_RS21565: HSERO_RS21565 - chemotaxis protein CheW, at 4,935,284 to 4,937,797
_RS21565
Position (kb) 4934
4935 Strain fitness (log2 ratio) -1
0
1
2 at 4933.229 kb on + strand at 4933.322 kb on + strand, within HSERO_RS21555 at 4933.335 kb on - strand, within HSERO_RS21555 at 4933.348 kb on + strand, within HSERO_RS21555 at 4933.348 kb on + strand, within HSERO_RS21555 at 4933.356 kb on - strand, within HSERO_RS21555 at 4933.356 kb on - strand, within HSERO_RS21555 at 4933.356 kb on - strand, within HSERO_RS21555 at 4933.356 kb on - strand, within HSERO_RS21555 at 4933.403 kb on + strand, within HSERO_RS21555 at 4933.442 kb on - strand, within HSERO_RS21555 at 4933.468 kb on + strand, within HSERO_RS21555 at 4933.633 kb on - strand, within HSERO_RS21555 at 4933.681 kb on + strand, within HSERO_RS21555 at 4933.728 kb on - strand, within HSERO_RS21555 at 4933.795 kb on + strand, within HSERO_RS21555 at 4933.851 kb on - strand, within HSERO_RS21555 at 4933.851 kb on - strand, within HSERO_RS21555 at 4933.934 kb on - strand, within HSERO_RS21555 at 4934.028 kb on + strand, within HSERO_RS21555 at 4934.077 kb on - strand at 4934.152 kb on + strand at 4934.160 kb on - strand at 4934.185 kb on - strand at 4934.230 kb on - strand, within HSERO_RS21560 at 4934.252 kb on + strand, within HSERO_RS21560 at 4934.333 kb on - strand, within HSERO_RS21560 at 4934.352 kb on - strand, within HSERO_RS21560 at 4934.425 kb on + strand, within HSERO_RS21560 at 4934.566 kb on + strand, within HSERO_RS21560 at 4934.638 kb on + strand, within HSERO_RS21560 at 4934.787 kb on - strand, within HSERO_RS21560 at 4934.859 kb on - strand at 4934.915 kb on + strand at 4934.922 kb on - strand at 4935.121 kb on - strand at 4935.223 kb on - strand at 4935.240 kb on - strand at 4935.305 kb on + strand at 4935.561 kb on + strand, within HSERO_RS21565 at 4935.618 kb on + strand, within HSERO_RS21565 at 4935.658 kb on + strand, within HSERO_RS21565 at 4935.727 kb on + strand, within HSERO_RS21565 at 4935.782 kb on - strand, within HSERO_RS21565 at 4935.905 kb on + strand, within HSERO_RS21565
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine remove 4,933,229 + -1.2 4,933,322 + HSERO_RS21555 0.15 -0.6 4,933,335 - HSERO_RS21555 0.16 +1.0 4,933,348 + HSERO_RS21555 0.17 +0.2 4,933,348 + HSERO_RS21555 0.17 +0.0 4,933,356 - HSERO_RS21555 0.18 -0.0 4,933,356 - HSERO_RS21555 0.18 +2.7 4,933,356 - HSERO_RS21555 0.18 -0.2 4,933,356 - HSERO_RS21555 0.18 +0.4 4,933,403 + HSERO_RS21555 0.23 +0.3 4,933,442 - HSERO_RS21555 0.27 -0.1 4,933,468 + HSERO_RS21555 0.29 -0.6 4,933,633 - HSERO_RS21555 0.46 -0.5 4,933,681 + HSERO_RS21555 0.51 -0.5 4,933,728 - HSERO_RS21555 0.56 +0.1 4,933,795 + HSERO_RS21555 0.63 -0.4 4,933,851 - HSERO_RS21555 0.68 -0.1 4,933,851 - HSERO_RS21555 0.68 -0.2 4,933,934 - HSERO_RS21555 0.77 +0.9 4,934,028 + HSERO_RS21555 0.86 -0.2 4,934,077 - -0.6 4,934,152 + +0.1 4,934,160 - -0.9 4,934,185 - -0.1 4,934,230 - HSERO_RS21560 0.12 +0.8 4,934,252 + HSERO_RS21560 0.15 +0.8 4,934,333 - HSERO_RS21560 0.25 -0.8 4,934,352 - HSERO_RS21560 0.28 +1.7 4,934,425 + HSERO_RS21560 0.37 +0.8 4,934,566 + HSERO_RS21560 0.56 +0.3 4,934,638 + HSERO_RS21560 0.65 +0.2 4,934,787 - HSERO_RS21560 0.84 -0.1 4,934,859 - +0.1 4,934,915 + -0.2 4,934,922 - -0.5 4,935,121 - -0.1 4,935,223 - +0.1 4,935,240 - +0.1 4,935,305 + -1.2 4,935,561 + HSERO_RS21565 0.11 +0.5 4,935,618 + HSERO_RS21565 0.13 +0.6 4,935,658 + HSERO_RS21565 0.15 +0.0 4,935,727 + HSERO_RS21565 0.18 +0.9 4,935,782 - HSERO_RS21565 0.20 -0.5 4,935,905 + HSERO_RS21565 0.25 +0.4
Or see this region's nucleotide sequence