Experiment: L-Histidine
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS02765 and HSERO_RS02770 are separated by 430 nucleotides HSERO_RS02770 and HSERO_RS02775 are separated by 255 nucleotides HSERO_RS02775 and HSERO_RS02780 are separated by 51 nucleotides HSERO_RS02780 and HSERO_RS02785 are separated by 401 nucleotides HSERO_RS02785 and HSERO_RS02790 are separated by 97 nucleotides
HSERO_RS02765: HSERO_RS02765 - general stress protein, at 611,776 to 611,985
_RS02765
HSERO_RS02770: HSERO_RS02770 - hypothetical protein, at 612,416 to 612,664
_RS02770
HSERO_RS02775: HSERO_RS02775 - hypothetical protein, at 612,920 to 613,150
_RS02775
HSERO_RS02780: HSERO_RS02780 - hypothetical protein, at 613,202 to 613,435
_RS02780
HSERO_RS02785: HSERO_RS02785 - hypothetical protein, at 613,837 to 614,028
_RS02785
HSERO_RS02790: HSERO_RS02790 - hypothetical protein, at 614,126 to 614,314
_RS02790
Position (kb) 612
613
614 Strain fitness (log2 ratio) -1
0
1
2 at 612.071 kb on - strand at 612.144 kb on + strand at 612.471 kb on + strand, within HSERO_RS02770 at 612.623 kb on - strand, within HSERO_RS02770 at 612.638 kb on + strand, within HSERO_RS02770 at 612.891 kb on + strand at 612.966 kb on - strand, within HSERO_RS02775 at 613.217 kb on + strand at 613.247 kb on - strand, within HSERO_RS02780 at 613.395 kb on - strand, within HSERO_RS02780 at 613.709 kb on + strand at 613.717 kb on - strand at 613.717 kb on - strand at 613.717 kb on - strand at 613.878 kb on + strand, within HSERO_RS02785 at 613.997 kb on - strand, within HSERO_RS02785 at 614.118 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine remove 612,071 - +0.4 612,144 + +0.7 612,471 + HSERO_RS02770 0.22 +1.8 612,623 - HSERO_RS02770 0.83 +0.1 612,638 + HSERO_RS02770 0.89 +1.3 612,891 + -0.1 612,966 - HSERO_RS02775 0.20 +0.4 613,217 + +0.3 613,247 - HSERO_RS02780 0.19 +0.1 613,395 - HSERO_RS02780 0.82 -0.3 613,709 + +0.4 613,717 - -0.3 613,717 - -0.2 613,717 - +0.8 613,878 + HSERO_RS02785 0.21 -0.1 613,997 - HSERO_RS02785 0.83 -0.9 614,118 - -0.0
Or see this region's nucleotide sequence