Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1679

Experiment: benzoic 0.29 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	benzoic 0.29 mg/ml
1,780,508	+		Ga0059261_1678	0.21	-0.3
1,780,508	+		Ga0059261_1678	0.21	+0.7
1,780,509	-		Ga0059261_1678	0.21	+0.3
1,780,509	-		Ga0059261_1678	0.21	-0.5
1,780,520	+		Ga0059261_1678	0.22	+0.8
1,780,520	+		Ga0059261_1678	0.22	-0.0
1,780,520	+		Ga0059261_1678	0.22	-0.8
1,780,520	+		Ga0059261_1678	0.22	-0.8
1,780,520	+		Ga0059261_1678	0.22	+0.5
1,780,520	+		Ga0059261_1678	0.22	-0.2
1,780,520	+		Ga0059261_1678	0.22	-0.3
1,780,520	+		Ga0059261_1678	0.22	+0.4
1,780,520	+		Ga0059261_1678	0.22	+1.3
1,780,520	+		Ga0059261_1678	0.22	-0.3
1,780,520	+		Ga0059261_1678	0.22	-0.1
1,780,521	-		Ga0059261_1678	0.22	-0.5
1,780,521	-		Ga0059261_1678	0.22	-1.2
1,780,521	-		Ga0059261_1678	0.22	+0.1
1,780,521	-		Ga0059261_1678	0.22	+0.2
1,780,521	-		Ga0059261_1678	0.22	+0.3
1,780,521	-		Ga0059261_1678	0.22	-0.3
1,780,521	-		Ga0059261_1678	0.22	+0.2
1,780,529	+		Ga0059261_1678	0.23	+0.4
1,780,529	+		Ga0059261_1678	0.23	+0.5
1,780,530	-		Ga0059261_1678	0.23	+0.4
1,780,530	-		Ga0059261_1678	0.23	+0.1
1,780,549	-		Ga0059261_1678	0.25	-0.7
1,780,655	+		Ga0059261_1678	0.36	-0.1
1,780,656	-		Ga0059261_1678	0.36	-0.2
1,780,656	-		Ga0059261_1678	0.36	+0.7
1,780,682	+		Ga0059261_1678	0.38	-1.0
1,780,682	+		Ga0059261_1678	0.38	+0.3
1,780,682	+		Ga0059261_1678	0.38	+0.5
1,780,682	+		Ga0059261_1678	0.38	-1.2
1,780,682	+		Ga0059261_1678	0.38	+1.1
1,780,682	+		Ga0059261_1678	0.38	-0.4
1,780,683	-		Ga0059261_1678	0.38	-0.1
1,780,683	-		Ga0059261_1678	0.38	+0.4
1,780,683	-		Ga0059261_1678	0.38	-0.3
1,780,683	-		Ga0059261_1678	0.38	+0.3
1,780,683	-		Ga0059261_1678	0.38	+1.0
1,780,683	-		Ga0059261_1678	0.38	-1.0
1,780,683	-		Ga0059261_1678	0.38	-1.1
1,780,683	-		Ga0059261_1678	0.38	-1.3
1,780,703	+		Ga0059261_1678	0.40	-0.3
1,780,704	-		Ga0059261_1678	0.41	-0.1
1,780,704	-		Ga0059261_1678	0.41	-0.4
1,780,715	+		Ga0059261_1678	0.42	+0.3
1,780,715	+		Ga0059261_1678	0.42	-0.1
1,780,715	+		Ga0059261_1678	0.42	+0.2
1,780,715	+		Ga0059261_1678	0.42	-0.1
1,780,716	-		Ga0059261_1678	0.42	-0.2
1,780,716	-				-0.3
1,780,716	-		Ga0059261_1678	0.42	+0.2
1,780,716	-		Ga0059261_1678	0.42	-0.1
1,780,718	+		Ga0059261_1678	0.42	-0.3
1,780,718	+		Ga0059261_1678	0.42	-0.5
1,780,718	+		Ga0059261_1678	0.42	+1.3
1,780,718	+		Ga0059261_1678	0.42	+0.2
1,780,718	+		Ga0059261_1678	0.42	+2.4
1,780,718	+		Ga0059261_1678	0.42	-0.0
1,780,719	-		Ga0059261_1678	0.42	-0.7
1,780,719	-		Ga0059261_1678	0.42	+0.7
1,780,719	-		Ga0059261_1678	0.42	+0.2
1,780,719	-		Ga0059261_1678	0.42	-0.5
1,780,719	-		Ga0059261_1678	0.42	-0.6
1,780,719	-		Ga0059261_1678	0.42	-0.4
1,780,719	-		Ga0059261_1678	0.42	+0.5
1,780,796	+		Ga0059261_1678	0.50	-0.7
1,780,796	+		Ga0059261_1678	0.50	+0.2
1,780,796	+		Ga0059261_1678	0.50	+0.2
1,780,796	+		Ga0059261_1678	0.50	-0.4
1,780,796	+		Ga0059261_1678	0.50	-1.4
1,780,796	+		Ga0059261_1678	0.50	-0.4
1,780,796	+		Ga0059261_1678	0.50	-0.4
1,780,797	-		Ga0059261_1678	0.50	-0.1
1,780,797	-		Ga0059261_1678	0.50	+0.2
1,780,797	-		Ga0059261_1678	0.50	+0.3
1,780,797	-		Ga0059261_1678	0.50	-0.2
1,780,797	-		Ga0059261_1678	0.50	+0.6
1,780,797	-		Ga0059261_1678	0.50	-0.0
1,780,797	-		Ga0059261_1678	0.50	-0.5
1,780,797	-		Ga0059261_1678	0.50	-0.3
1,780,877	+		Ga0059261_1678	0.58	+0.4
1,780,877	+		Ga0059261_1678	0.58	+0.8
1,780,877	+		Ga0059261_1678	0.58	-0.2
1,780,877	+		Ga0059261_1678	0.58	+0.2
1,780,878	-		Ga0059261_1678	0.58	+0.4
1,780,878	-		Ga0059261_1678	0.58	-0.5
1,780,878	-		Ga0059261_1678	0.58	+0.6
1,780,878	-				+0.7
1,780,878	-		Ga0059261_1678	0.58	+0.1
1,780,879	+		Ga0059261_1678	0.58	-0.0
1,780,879	+		Ga0059261_1678	0.58	-0.1
1,780,879	+		Ga0059261_1678	0.58	-1.1
1,780,879	+		Ga0059261_1678	0.58	+0.5
1,780,879	+		Ga0059261_1678	0.58	-0.6
1,780,879	+		Ga0059261_1678	0.58	+1.3
1,780,879	+		Ga0059261_1678	0.58	+0.5
1,780,880	-		Ga0059261_1678	0.59	-0.1
1,780,880	-		Ga0059261_1678	0.59	+0.3
1,780,880	-		Ga0059261_1678	0.59	+0.1
1,780,880	-		Ga0059261_1678	0.59	+0.7
1,780,880	-		Ga0059261_1678	0.59	+0.2
1,780,880	-		Ga0059261_1678	0.59	+0.1
1,780,880	-		Ga0059261_1678	0.59	+0.3
1,780,880	-		Ga0059261_1678	0.59	-0.2
1,780,880	-		Ga0059261_1678	0.59	-0.2
1,780,880	-		Ga0059261_1678	0.59	-0.3
1,780,880	-				+0.1
1,780,880	-		Ga0059261_1678	0.59	+0.4
1,780,880	-		Ga0059261_1678	0.59	+0.2
1,780,886	+		Ga0059261_1678	0.59	-0.5
1,780,886	+		Ga0059261_1678	0.59	-0.2
1,780,886	+		Ga0059261_1678	0.59	-0.1
1,780,886	+		Ga0059261_1678	0.59	-0.0
1,780,886	+		Ga0059261_1678	0.59	-1.3
1,780,886	+		Ga0059261_1678	0.59	+0.9
1,780,886	+		Ga0059261_1678	0.59	-0.5
1,780,887	-		Ga0059261_1678	0.59	-0.0
1,780,887	-		Ga0059261_1678	0.59	-0.2
1,780,887	-				+1.7
1,780,887	-		Ga0059261_1678	0.59	-0.5
1,780,887	-		Ga0059261_1678	0.59	-0.2
1,780,887	-		Ga0059261_1678	0.59	+0.0
1,780,887	-		Ga0059261_1678	0.59	-0.2
1,780,887	-		Ga0059261_1678	0.59	+0.2
1,780,887	-		Ga0059261_1678	0.59	+0.7
1,780,887	-		Ga0059261_1678	0.59	+0.9
1,781,201	+				-0.3
1,781,201	+				+0.0
1,781,202	-				-0.2
1,781,202	-				-0.1
1,781,331	+				-0.1
1,781,332	-				+0.1
1,781,332	-				-0.5
1,781,332	-				+0.5
1,781,487	+		Ga0059261_1679	0.12	-0.0
1,781,487	+		Ga0059261_1679	0.12	+0.4
1,781,487	+		Ga0059261_1679	0.12	-0.7
1,781,487	+		Ga0059261_1679	0.12	+0.2
1,781,487	+				+2.2
1,781,487	+		Ga0059261_1679	0.12	+0.3
1,781,488	-		Ga0059261_1679	0.12	+0.5
1,781,488	-		Ga0059261_1679	0.12	-0.2
1,781,505	+		Ga0059261_1679	0.14	-0.1
1,781,505	+		Ga0059261_1679	0.14	+0.0
1,781,505	+		Ga0059261_1679	0.14	-0.5
1,781,505	+		Ga0059261_1679	0.14	+0.3
1,781,506	-		Ga0059261_1679	0.14	+0.9
1,781,506	-		Ga0059261_1679	0.14	-1.2
1,781,506	-		Ga0059261_1679	0.14	-0.5
1,781,506	-		Ga0059261_1679	0.14	-0.9
1,781,506	-		Ga0059261_1679	0.14	-0.3
1,781,506	-		Ga0059261_1679	0.14	-0.1
1,781,506	-		Ga0059261_1679	0.14	+0.3
1,781,506	-		Ga0059261_1679	0.14	-0.6
1,781,598	+		Ga0059261_1679	0.21	+0.1
1,781,598	+		Ga0059261_1679	0.21	+0.1
1,781,598	+		Ga0059261_1679	0.21	+0.1
1,781,598	+		Ga0059261_1679	0.21	-0.1
1,781,598	+		Ga0059261_1679	0.21	-0.4
1,781,598	+		Ga0059261_1679	0.21	-0.2
1,781,598	+		Ga0059261_1679	0.21	-0.4
1,781,598	+		Ga0059261_1679	0.21	+0.4
1,781,598	+		Ga0059261_1679	0.21	-0.4
1,781,598	+		Ga0059261_1679	0.21	+1.0
1,781,599	-		Ga0059261_1679	0.21	+0.9
1,781,599	-		Ga0059261_1679	0.21	+0.6
1,781,599	-		Ga0059261_1679	0.21	+0.6
1,781,599	-				+0.7
1,781,599	-		Ga0059261_1679	0.21	-0.3
1,781,599	-		Ga0059261_1679	0.21	+1.2
1,781,599	-		Ga0059261_1679	0.21	-0.8
1,781,599	-		Ga0059261_1679	0.21	+0.3
1,781,599	-		Ga0059261_1679	0.21	+0.1
1,781,599	-		Ga0059261_1679	0.21	+0.9
1,781,599	-		Ga0059261_1679	0.21	-0.0
1,781,599	-		Ga0059261_1679	0.21	-0.1
1,781,599	-		Ga0059261_1679	0.21	-0.3
1,781,665	+		Ga0059261_1679	0.26	-0.2
1,781,665	+		Ga0059261_1679	0.26	-0.6
1,781,666	-		Ga0059261_1679	0.26	+0.5
1,781,666	-		Ga0059261_1679	0.26	-0.1
1,781,666	-		Ga0059261_1679	0.26	-0.0
1,781,666	-		Ga0059261_1679	0.26	+0.8
1,781,666	-		Ga0059261_1679	0.26	-0.4
1,781,667	+		Ga0059261_1679	0.26	-0.0
1,781,667	+		Ga0059261_1679	0.26	+0.4
1,781,667	+		Ga0059261_1679	0.26	+0.6
1,781,668	-		Ga0059261_1679	0.26	-0.4
1,781,668	-		Ga0059261_1679	0.26	+0.2
1,781,668	-		Ga0059261_1679	0.26	+0.0
1,781,668	-		Ga0059261_1679	0.26	+0.3
1,781,668	-		Ga0059261_1679	0.26	-0.0
1,781,668	-		Ga0059261_1679	0.26	-0.6
1,781,668	-		Ga0059261_1679	0.26	+0.2
1,781,733	+		Ga0059261_1679	0.31	-0.5
1,781,733	+		Ga0059261_1679	0.31	+0.2
1,781,733	+		Ga0059261_1679	0.31	+0.0
1,781,733	+		Ga0059261_1679	0.31	+0.2
1,781,733	+		Ga0059261_1679	0.31	-0.7
1,781,733	+		Ga0059261_1679	0.31	-0.1
1,781,733	+		Ga0059261_1679	0.31	+0.1
1,781,733	+		Ga0059261_1679	0.31	+0.5
1,781,734	-		Ga0059261_1679	0.31	-1.5
1,781,734	-		Ga0059261_1679	0.31	+0.0
1,781,734	-		Ga0059261_1679	0.31	+0.7
1,781,970	+		Ga0059261_1679	0.50	+0.4
1,781,971	-		Ga0059261_1679	0.50	+0.6
1,781,971	-		Ga0059261_1679	0.50	-0.4
1,781,971	-		Ga0059261_1679	0.50	-0.2
1,781,971	-		Ga0059261_1679	0.50	+0.5
1,782,048	+		Ga0059261_1679	0.56	+0.7
1,782,048	+		Ga0059261_1679	0.56	-0.5
1,782,048	+		Ga0059261_1679	0.56	-0.0
1,782,048	+		Ga0059261_1679	0.56	+1.2
1,782,048	+		Ga0059261_1679	0.56	-0.5
1,782,048	+		Ga0059261_1679	0.56	+0.4
1,782,048	+		Ga0059261_1679	0.56	+0.3
1,782,048	+		Ga0059261_1679	0.56	+0.9
1,782,049	-		Ga0059261_1679	0.56	-0.1
1,782,049	-				-0.3
1,782,049	-		Ga0059261_1679	0.56	-0.3
1,782,049	-		Ga0059261_1679	0.56	+1.0
1,782,049	-		Ga0059261_1679	0.56	+0.4
1,782,049	-		Ga0059261_1679	0.56	-0.2
1,782,049	-		Ga0059261_1679	0.56	-0.4
1,782,049	-		Ga0059261_1679	0.56	+0.1
1,782,049	-		Ga0059261_1679	0.56	+1.2
1,782,049	-		Ga0059261_1679	0.56	-0.4
1,782,106	+		Ga0059261_1679	0.60	-0.2
1,782,106	+		Ga0059261_1679	0.60	-0.3
1,782,233	+		Ga0059261_1679	0.70	-0.2
1,782,233	+		Ga0059261_1679	0.70	-0.6
1,782,233	+		Ga0059261_1679	0.70	+1.0
1,782,234	-		Ga0059261_1679	0.70	-0.6
1,782,291	+		Ga0059261_1679	0.74	+0.5
1,782,291	+		Ga0059261_1679	0.74	+0.5
1,782,291	+		Ga0059261_1679	0.74	+0.1
1,782,291	+		Ga0059261_1679	0.74	-0.3
1,782,292	-		Ga0059261_1679	0.75	-0.2
1,782,292	-		Ga0059261_1679	0.75	+0.5
1,782,292	-		Ga0059261_1679	0.75	-0.1
1,782,292	-		Ga0059261_1679	0.75	+1.1
1,782,294	+		Ga0059261_1679	0.75	-0.5
1,782,294	+		Ga0059261_1679	0.75	+1.6
1,782,294	+		Ga0059261_1679	0.75	-0.1
1,782,294	+		Ga0059261_1679	0.75	-0.7
1,782,294	+		Ga0059261_1679	0.75	+0.0
1,782,294	+		Ga0059261_1679	0.75	-0.1
1,782,294	+				+1.7
1,782,294	+		Ga0059261_1679	0.75	+0.3
1,782,294	+		Ga0059261_1679	0.75	-0.3
1,782,294	+		Ga0059261_1679	0.75	+0.1
1,782,294	+		Ga0059261_1679	0.75	+0.3
1,782,294	+		Ga0059261_1679	0.75	-0.3
1,782,294	+		Ga0059261_1679	0.75	+0.3
1,782,294	+		Ga0059261_1679	0.75	+0.2
1,782,295	-		Ga0059261_1679	0.75	-0.2
1,782,295	-		Ga0059261_1679	0.75	-0.6
1,782,295	-		Ga0059261_1679	0.75	-0.4
1,782,295	-		Ga0059261_1679	0.75	-1.5
1,782,295	-		Ga0059261_1679	0.75	+0.2
1,782,295	-				+1.1
1,782,295	-		Ga0059261_1679	0.75	+0.5
1,782,295	-				+1.1
1,782,295	-		Ga0059261_1679	0.75	-0.1
1,782,295	-		Ga0059261_1679	0.75	+0.5
1,782,295	-		Ga0059261_1679	0.75	+0.5
1,782,295	-				+2.1
1,782,295	-		Ga0059261_1679	0.75	+0.5
1,782,432	+		Ga0059261_1679	0.85	+0.5
1,782,432	+		Ga0059261_1679	0.85	-0.4
1,782,432	+		Ga0059261_1679	0.85	-0.4
1,782,432	+		Ga0059261_1679	0.85	-0.0
1,782,433	-		Ga0059261_1679	0.86	+0.2
1,782,433	-		Ga0059261_1679	0.86	+0.0
1,782,433	-		Ga0059261_1679	0.86	-0.1
1,782,498	+				+0.0
1,782,499	-				-0.1
1,782,499	-				-0.0
1,782,499	-				+0.4
1,782,499	-				+0.1
1,782,516	+				-2.1
1,782,516	+				+0.8
1,782,516	+				-0.1
1,782,517	-				+0.2
1,782,517	-				+0.1
1,782,517	-				-0.4
1,782,677	+				-0.4
1,782,677	+				-0.1
1,782,677	+				-0.4
1,782,677	+				-0.5
1,782,677	+				-0.1
1,782,677	+				-0.9
1,782,677	+				+0.3
1,782,677	+				+0.1
1,782,677	+				+0.7
1,782,677	+				+0.3
1,782,677	+				-1.2
1,782,678	-				+0.3
1,782,678	-				+0.1
1,782,678	-				+0.2
1,782,678	-				+1.0
1,782,678	-				+1.1
1,782,678	-				+0.7
1,782,678	-				-0.0
1,782,678	-				-0.6
1,782,678	-				-0.1
1,782,678	-				+0.1
1,782,678	-				+0.1
1,782,678	-				+1.7
1,782,678	-				+0.2
1,782,679	+				+0.3
1,782,679	+				+0.4
1,782,679	+				-0.3
1,782,679	+				-0.0
1,782,679	+				-0.1
1,782,679	+				-0.1
1,782,679	+				-0.5
1,782,679	+				+1.5
1,782,679	+				+0.1
1,782,679	+				-0.4
1,782,679	+				+0.5
1,782,679	+				-0.7
1,782,679	+				-0.8
1,782,680	-				+0.5
1,782,680	-				+0.1
1,782,680	-				-0.0
1,782,680	-				+0.2
1,782,680	-				-1.1
1,782,680	-				-0.0
1,782,680	-				+0.1
1,782,680	-				+0.7
1,782,680	-				+0.2
1,782,680	-				+0.3
1,782,694	+				-0.5
1,782,694	+				+0.7
1,782,695	-				+0.9
1,782,695	-				-0.3
1,782,695	-				+0.7
1,782,840	+		Ga0059261_1680	0.14	+0.9
1,782,840	+		Ga0059261_1680	0.14	-0.2
1,782,840	+		Ga0059261_1680	0.14	+1.5
1,782,841	-		Ga0059261_1680	0.14	+0.7
1,782,841	-		Ga0059261_1680	0.14	+0.2
1,782,905	-		Ga0059261_1680	0.19	-0.3
1,782,997	+		Ga0059261_1680	0.25	-0.2
1,782,997	+		Ga0059261_1680	0.25	+0.4
1,782,998	-		Ga0059261_1680	0.25	+0.0
1,782,998	-		Ga0059261_1680	0.25	-0.1
1,782,998	-		Ga0059261_1680	0.25	+0.2
1,782,998	-		Ga0059261_1680	0.25	-0.7
1,783,207	+		Ga0059261_1680	0.40	+0.1
1,783,207	+		Ga0059261_1680	0.40	+0.2
1,783,207	+		Ga0059261_1680	0.40	+0.2
1,783,207	+		Ga0059261_1680	0.40	-0.6
1,783,208	-				+0.3
1,783,208	-		Ga0059261_1680	0.40	+1.4
1,783,208	-				+0.7
1,783,208	-		Ga0059261_1680	0.40	+0.1
1,783,208	-		Ga0059261_1680	0.40	-0.7
1,783,208	-		Ga0059261_1680	0.40	-0.1
1,783,208	-		Ga0059261_1680	0.40	-0.7
1,783,208	-		Ga0059261_1680	0.40	+0.7
1,783,208	-		Ga0059261_1680	0.40	+0.4
1,783,208	-		Ga0059261_1680	0.40	+0.4
1,783,208	-		Ga0059261_1680	0.40	+0.1
1,783,562	+		Ga0059261_1680	0.65	-0.8
1,783,562	+				+1.1
1,783,562	+		Ga0059261_1680	0.65	+0.1
1,783,563	-		Ga0059261_1680	0.65	+1.7
1,783,563	-		Ga0059261_1680	0.65	+0.2