Strain Fitness in Shewanella loihica PV-4 around Shew_3610
Experiment: Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Aluminum chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
4,307,094 | + | Shew_3608 | 0.72 | +0.9 | |
4,307,322 | + | -1.5 | |||
4,307,398 | + | Shew_3609 | 0.19 | +0.4 | |
4,307,431 | - | Shew_3609 | 0.23 | -0.5 | |
4,307,849 | + | Shew_3609 | 0.78 | -3.6 | |
4,308,071 | + | -3.3 | |||
4,308,206 | - | Shew_3610 | 0.36 | -1.0 | |
4,308,350 | + | Shew_3610 | 0.66 | -2.3 | |
4,308,475 | + | -2.1 | |||
4,308,495 | + | -2.2 | |||
4,308,530 | - | -0.8 | |||
4,308,829 | + | Shew_3611 | 0.27 | -1.2 | |
4,308,836 | - | Shew_3611 | 0.27 | -0.2 | |
4,309,378 | - | Shew_3611 | 0.73 | -3.2 |
Or see this region's nucleotide sequence