Strain Fitness in Shewanella loihica PV-4 around Shew_2427
Experiment: Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Aluminum chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
2,852,494 | - | fadI | Shew_2426 | 0.79 | +0.3 |
2,852,827 | + | -0.1 | |||
2,852,872 | - | +0.0 | |||
2,853,398 | - | Shew_2427 | 0.24 | -0.7 | |
2,853,646 | + | Shew_2427 | 0.49 | -1.2 | |
2,853,752 | - | Shew_2427 | 0.61 | -0.9 | |
2,854,742 | - | Shew_2428 | 0.66 | -0.0 | |
2,854,911 | - | Shew_2428 | 0.84 | -1.1 | |
2,855,116 | - | Shew_2429 | 0.12 | -1.1 |
Or see this region's nucleotide sequence