Strain Fitness in Shewanella loihica PV-4 around Shew_2040
Experiment: Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Aluminum chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
2,353,705 | + | Shew_2039 | 0.79 | -0.1 | |
2,353,713 | - | Shew_2039 | 0.79 | +0.4 | |
2,353,737 | + | Shew_2039 | 0.80 | -0.1 | |
2,353,737 | + | Shew_2039 | 0.80 | +0.1 | |
2,354,664 | + | Shew_2040 | 0.23 | +0.5 | |
2,355,244 | + | Shew_2040 | 0.79 | -0.1 | |
2,355,859 | - | Shew_2041 | 0.16 | -4.5 | |
2,356,181 | + | Shew_2041 | 0.36 | -3.1 | |
2,356,330 | - | Shew_2041 | 0.45 | -3.7 |
Or see this region's nucleotide sequence