Experiment: Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0660 and Shew_0661 are separated by 70 nucleotides Shew_0661 and Shew_0662 are separated by 234 nucleotides Shew_0662 and Shew_0663 are separated by 6 nucleotides Shew_0663 and Shew_0664 overlap by 1 nucleotides
Shew_0660: Shew_0660 - hypothetical protein (RefSeq), at 750,748 to 751,584
_0660
Shew_0661: Shew_0661 - hypothetical protein (RefSeq), at 751,655 to 751,969
_0661
Shew_0662: Shew_0662 - NAD(P) transhydrogenase, beta subunit (RefSeq), at 752,204 to 753,586
_0662
Shew_0663: Shew_0663 - oxidoreductase (RefSeq), at 753,593 to 753,868
_0663
Shew_0664: Shew_0664 - NAD(P) transhydrogenase subunit alpha (RefSeq), at 753,868 to 755,037
_0664
Position (kb) 752
753
754 Strain fitness (log2 ratio) -1
0
1 at 751.238 kb on + strand, within Shew_0660 at 751.246 kb on - strand, within Shew_0660 at 751.246 kb on - strand, within Shew_0660 at 751.246 kb on - strand, within Shew_0660 at 751.370 kb on + strand, within Shew_0660 at 751.524 kb on + strand at 751.864 kb on - strand, within Shew_0661 at 752.282 kb on - strand at 752.481 kb on + strand, within Shew_0662 at 752.585 kb on - strand, within Shew_0662 at 752.882 kb on + strand, within Shew_0662 at 753.631 kb on + strand, within Shew_0663 at 753.737 kb on - strand, within Shew_0663 at 753.853 kb on - strand at 754.355 kb on + strand, within Shew_0664 at 754.430 kb on - strand, within Shew_0664 at 754.471 kb on - strand, within Shew_0664 at 754.499 kb on - strand, within Shew_0664
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 1 mM remove 751,238 + Shew_0660 0.59 +0.2 751,246 - Shew_0660 0.59 -0.2 751,246 - Shew_0660 0.59 -0.1 751,246 - Shew_0660 0.59 +0.0 751,370 + Shew_0660 0.74 -1.0 751,524 + -0.3 751,864 - Shew_0661 0.66 -0.1 752,282 - -0.1 752,481 + Shew_0662 0.20 -0.5 752,585 - Shew_0662 0.28 -0.7 752,882 + Shew_0662 0.49 -0.1 753,631 + Shew_0663 0.14 -0.1 753,737 - Shew_0663 0.52 -0.9 753,853 - +0.1 754,355 + Shew_0664 0.42 -0.6 754,430 - Shew_0664 0.48 +0.4 754,471 - Shew_0664 0.52 +0.3 754,499 - Shew_0664 0.54 -0.4
Or see this region's nucleotide sequence