Experiment: MoYLS4 no iron
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2496 and DVU2497 are separated by 235 nucleotides DVU2497 and DVU2498 are separated by 24 nucleotides DVU2498 and ftsZ are separated by 228 nucleotides
DVU2496: DVU2496 - lipoprotein, putative (TIGR), at 2,607,928 to 2,608,380
DVU2496
DVU2497: DVU2497 - lipoprotein, putative (TIGR), at 2,608,616 to 2,609,350
DVU2497
DVU2498: DVU2498 - hypothetical protein (TIGR), at 2,609,375 to 2,609,668
DVU2498
DVU2499: ftsZ - cell division protein FtsZ (TIGR), at 2,609,897 to 2,611,246
ftsZ
Position (kb)
2609
2610 Strain fitness (log2 ratio)
-1
0
1 at 2608.403 kb on - strand at 2608.503 kb on + strand at 2608.566 kb on + strand at 2608.714 kb on - strand, within DVU2497 at 2608.806 kb on - strand, within DVU2497 at 2608.839 kb on + strand, within DVU2497 at 2608.860 kb on + strand, within DVU2497 at 2609.010 kb on - strand, within DVU2497 at 2609.050 kb on + strand, within DVU2497 at 2609.050 kb on + strand, within DVU2497 at 2609.050 kb on + strand, within DVU2497 at 2609.058 kb on - strand, within DVU2497 at 2609.058 kb on - strand, within DVU2497 at 2609.109 kb on + strand, within DVU2497 at 2609.145 kb on - strand, within DVU2497 at 2609.244 kb on + strand, within DVU2497 at 2609.353 kb on - strand at 2609.480 kb on + strand, within DVU2498 at 2609.777 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 no iron remove 2,608,403 - -1.4 2,608,503 + -0.2 2,608,566 + -0.2 2,608,714 - DVU2497 0.13 -1.1 2,608,806 - DVU2497 0.26 -0.2 2,608,839 + DVU2497 0.30 -0.2 2,608,860 + DVU2497 0.33 -0.2 2,609,010 - DVU2497 0.54 -0.1 2,609,050 + DVU2497 0.59 -0.4 2,609,050 + DVU2497 0.59 +0.1 2,609,050 + DVU2497 0.59 -0.3 2,609,058 - DVU2497 0.60 +0.2 2,609,058 - DVU2497 0.60 -0.9 2,609,109 + DVU2497 0.67 +0.2 2,609,145 - DVU2497 0.72 +1.0 2,609,244 + DVU2497 0.85 +0.1 2,609,353 - -1.5 2,609,480 + DVU2498 0.36 -0.9 2,609,777 + -0.7
Or see this region's nucleotide sequence