Experiment: R2A with bismuth(III) chloride 0.03125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LRK54_RS00945 and LRK54_RS00950 are separated by 317 nucleotides LRK54_RS00950 and LRK54_RS00955 are separated by 84 nucleotides
LRK54_RS00945: LRK54_RS00945 - GNAT family N-acetyltransferase, at 209,735 to 210,685
_RS00945
LRK54_RS00950: LRK54_RS00950 - 2-oxoglutarate dehydrogenase E1 component, at 211,003 to 213,843
_RS00950
LRK54_RS00955: LRK54_RS00955 - 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase, at 213,928 to 215,115
_RS00955
Position (kb) 211
212
213
214 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 210.089 kb on + strand, within LRK54_RS00945 at 210.089 kb on + strand, within LRK54_RS00945 at 210.089 kb on + strand, within LRK54_RS00945 at 210.089 kb on + strand, within LRK54_RS00945 at 210.089 kb on + strand, within LRK54_RS00945 at 210.089 kb on + strand, within LRK54_RS00945 at 210.089 kb on + strand, within LRK54_RS00945 at 210.089 kb on + strand, within LRK54_RS00945 at 210.089 kb on + strand, within LRK54_RS00945 at 210.089 kb on + strand, within LRK54_RS00945 at 210.090 kb on - strand, within LRK54_RS00945 at 210.090 kb on - strand, within LRK54_RS00945 at 210.090 kb on - strand, within LRK54_RS00945 at 210.090 kb on - strand, within LRK54_RS00945 at 210.090 kb on - strand, within LRK54_RS00945 at 210.293 kb on + strand, within LRK54_RS00945 at 210.293 kb on + strand, within LRK54_RS00945 at 210.293 kb on + strand, within LRK54_RS00945 at 210.293 kb on + strand, within LRK54_RS00945 at 210.293 kb on + strand, within LRK54_RS00945 at 210.293 kb on + strand, within LRK54_RS00945 at 210.294 kb on - strand, within LRK54_RS00945 at 210.294 kb on - strand, within LRK54_RS00945 at 210.294 kb on - strand, within LRK54_RS00945 at 210.294 kb on - strand, within LRK54_RS00945 at 210.294 kb on - strand, within LRK54_RS00945 at 210.294 kb on - strand, within LRK54_RS00945 at 210.294 kb on - strand, within LRK54_RS00945 at 210.320 kb on + strand, within LRK54_RS00945 at 210.320 kb on + strand, within LRK54_RS00945 at 210.320 kb on + strand, within LRK54_RS00945 at 210.320 kb on + strand, within LRK54_RS00945 at 210.320 kb on + strand, within LRK54_RS00945 at 210.320 kb on + strand, within LRK54_RS00945 at 210.320 kb on + strand, within LRK54_RS00945 at 210.320 kb on + strand, within LRK54_RS00945 at 210.320 kb on + strand, within LRK54_RS00945 at 210.320 kb on + strand, within LRK54_RS00945 at 210.320 kb on + strand, within LRK54_RS00945 at 210.320 kb on + strand, within LRK54_RS00945 at 210.320 kb on + strand, within LRK54_RS00945 at 210.320 kb on + strand, within LRK54_RS00945 at 210.320 kb on + strand, within LRK54_RS00945 at 210.320 kb on + strand, within LRK54_RS00945 at 210.320 kb on + strand, within LRK54_RS00945 at 210.320 kb on + strand, within LRK54_RS00945 at 210.320 kb on + strand, within LRK54_RS00945 at 210.320 kb on + strand, within LRK54_RS00945 at 210.321 kb on - strand, within LRK54_RS00945 at 210.321 kb on - strand, within LRK54_RS00945 at 210.321 kb on - strand, within LRK54_RS00945 at 210.321 kb on - strand, within LRK54_RS00945 at 210.321 kb on - strand, within LRK54_RS00945 at 210.321 kb on - strand, within LRK54_RS00945 at 210.321 kb on - strand, within LRK54_RS00945 at 210.321 kb on - strand, within LRK54_RS00945 at 210.321 kb on - strand, within LRK54_RS00945 at 210.321 kb on - strand, within LRK54_RS00945 at 210.321 kb on - strand, within LRK54_RS00945 at 210.321 kb on - strand, within LRK54_RS00945 at 210.321 kb on - strand, within LRK54_RS00945 at 210.506 kb on + strand, within LRK54_RS00945 at 210.506 kb on + strand, within LRK54_RS00945 at 210.506 kb on + strand, within LRK54_RS00945 at 210.506 kb on + strand, within LRK54_RS00945 at 210.506 kb on + strand, within LRK54_RS00945 at 210.506 kb on + strand, within LRK54_RS00945 at 210.506 kb on + strand, within LRK54_RS00945 at 210.506 kb on + strand, within LRK54_RS00945 at 210.506 kb on + strand, within LRK54_RS00945 at 210.506 kb on + strand, within LRK54_RS00945 at 210.506 kb on + strand, within LRK54_RS00945 at 210.506 kb on + strand, within LRK54_RS00945 at 210.506 kb on + strand, within LRK54_RS00945 at 210.506 kb on + strand, within LRK54_RS00945 at 210.506 kb on + strand, within LRK54_RS00945 at 210.506 kb on + strand, within LRK54_RS00945 at 210.506 kb on + strand, within LRK54_RS00945 at 210.506 kb on + strand, within LRK54_RS00945 at 210.506 kb on + strand, within LRK54_RS00945 at 210.506 kb on + strand, within LRK54_RS00945 at 210.506 kb on + strand, within LRK54_RS00945 at 210.506 kb on + strand, within LRK54_RS00945 at 210.506 kb on + strand, within LRK54_RS00945 at 210.506 kb on + strand, within LRK54_RS00945 at 210.506 kb on + strand, within LRK54_RS00945 at 210.506 kb on + strand, within LRK54_RS00945 at 210.506 kb on + strand, within LRK54_RS00945 at 210.506 kb on + strand, within LRK54_RS00945 at 210.506 kb on + strand, within LRK54_RS00945 at 210.506 kb on + strand, within LRK54_RS00945 at 210.506 kb on + strand, within LRK54_RS00945 at 210.506 kb on + strand, within LRK54_RS00945 at 210.506 kb on + strand, within LRK54_RS00945 at 210.506 kb on + strand, within LRK54_RS00945 at 210.506 kb on + strand, within LRK54_RS00945 at 210.506 kb on + strand, within LRK54_RS00945 at 210.506 kb on + strand, within LRK54_RS00945 at 210.506 kb on + strand, within LRK54_RS00945 at 210.506 kb on + strand, within LRK54_RS00945 at 210.506 kb on + strand, within LRK54_RS00945 at 210.506 kb on + strand, within LRK54_RS00945 at 210.506 kb on + strand, within LRK54_RS00945 at 210.507 kb on - strand, within LRK54_RS00945 at 210.507 kb on - strand, within LRK54_RS00945 at 210.507 kb on - strand, within LRK54_RS00945 at 210.507 kb on - strand, within LRK54_RS00945 at 210.507 kb on - strand, within LRK54_RS00945 at 210.507 kb on - strand, within LRK54_RS00945 at 210.507 kb on - strand, within LRK54_RS00945 at 210.507 kb on - strand, within LRK54_RS00945 at 210.507 kb on - strand, within LRK54_RS00945 at 210.507 kb on - strand, within LRK54_RS00945 at 210.507 kb on - strand, within LRK54_RS00945 at 210.507 kb on - strand, within LRK54_RS00945 at 210.507 kb on - strand, within LRK54_RS00945 at 210.507 kb on - strand, within LRK54_RS00945 at 210.507 kb on - strand, within LRK54_RS00945 at 210.507 kb on - strand, within LRK54_RS00945 at 210.507 kb on - strand, within LRK54_RS00945 at 210.507 kb on - strand, within LRK54_RS00945 at 210.507 kb on - strand, within LRK54_RS00945 at 210.507 kb on - strand, within LRK54_RS00945 at 210.507 kb on - strand, within LRK54_RS00945 at 210.507 kb on - strand, within LRK54_RS00945 at 210.507 kb on - strand, within LRK54_RS00945 at 210.507 kb on - strand, within LRK54_RS00945 at 210.507 kb on - strand, within LRK54_RS00945 at 210.507 kb on - strand, within LRK54_RS00945 at 210.518 kb on + strand, within LRK54_RS00945 at 210.518 kb on + strand, within LRK54_RS00945 at 210.518 kb on + strand, within LRK54_RS00945 at 210.518 kb on + strand, within LRK54_RS00945 at 210.518 kb on + strand, within LRK54_RS00945 at 210.519 kb on - strand, within LRK54_RS00945 at 210.519 kb on - strand, within LRK54_RS00945 at 210.519 kb on - strand, within LRK54_RS00945 at 210.519 kb on - strand, within LRK54_RS00945 at 210.542 kb on + strand, within LRK54_RS00945 at 210.542 kb on + strand, within LRK54_RS00945 at 210.543 kb on - strand, within LRK54_RS00945 at 210.683 kb on + strand at 210.683 kb on + strand at 210.683 kb on + strand at 210.683 kb on + strand at 210.683 kb on + strand at 210.683 kb on + strand at 210.683 kb on + strand at 210.683 kb on + strand at 210.684 kb on - strand at 210.684 kb on - strand at 210.684 kb on - strand at 210.684 kb on - strand at 210.684 kb on - strand at 210.800 kb on + strand at 210.800 kb on + strand at 210.800 kb on + strand at 210.800 kb on + strand at 210.800 kb on + strand at 210.800 kb on + strand at 210.800 kb on + strand at 210.800 kb on + strand at 210.800 kb on + strand at 210.801 kb on - strand at 210.801 kb on - strand at 210.801 kb on - strand at 210.801 kb on - strand at 210.801 kb on - strand at 210.877 kb on + strand at 210.877 kb on + strand at 210.877 kb on + strand at 210.877 kb on + strand at 210.877 kb on + strand at 210.877 kb on + strand at 210.877 kb on + strand at 210.877 kb on + strand at 210.877 kb on + strand at 210.877 kb on + strand at 210.877 kb on + strand at 210.877 kb on + strand at 210.877 kb on + strand at 210.877 kb on + strand at 210.877 kb on + strand at 210.878 kb on - strand at 210.879 kb on + strand at 210.879 kb on + strand at 210.879 kb on + strand at 210.879 kb on + strand at 210.879 kb on + strand at 210.879 kb on + strand at 210.879 kb on + strand at 210.879 kb on + strand at 210.879 kb on + strand at 213.841 kb on + strand at 213.841 kb on + strand at 213.841 kb on + strand at 213.841 kb on + strand at 213.841 kb on + strand at 213.841 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with bismuth(III) chloride 0.03125 mM remove 210,089 + LRK54_RS00945 0.37 -1.3 210,089 + LRK54_RS00945 0.37 +0.2 210,089 + LRK54_RS00945 0.37 +0.2 210,089 + LRK54_RS00945 0.37 -1.3 210,089 + LRK54_RS00945 0.37 -0.7 210,089 + LRK54_RS00945 0.37 -0.9 210,089 + LRK54_RS00945 0.37 +0.2 210,089 + LRK54_RS00945 0.37 +0.6 210,089 + LRK54_RS00945 0.37 -1.3 210,089 + LRK54_RS00945 0.37 +0.5 210,090 - LRK54_RS00945 0.37 -0.1 210,090 - LRK54_RS00945 0.37 -0.1 210,090 - LRK54_RS00945 0.37 -0.7 210,090 - LRK54_RS00945 0.37 -0.7 210,090 - LRK54_RS00945 0.37 +2.9 210,293 + LRK54_RS00945 0.59 +0.4 210,293 + LRK54_RS00945 0.59 +0.1 210,293 + LRK54_RS00945 0.59 +0.4 210,293 + LRK54_RS00945 0.59 +0.4 210,293 + LRK54_RS00945 0.59 -0.7 210,293 + LRK54_RS00945 0.59 +0.9 210,294 - LRK54_RS00945 0.59 +1.9 210,294 - LRK54_RS00945 0.59 +1.1 210,294 - LRK54_RS00945 0.59 -0.5 210,294 - LRK54_RS00945 0.59 -0.7 210,294 - LRK54_RS00945 0.59 +1.9 210,294 - LRK54_RS00945 0.59 +2.2 210,294 - LRK54_RS00945 0.59 +0.1 210,320 + LRK54_RS00945 0.62 +0.2 210,320 + LRK54_RS00945 0.62 -0.0 210,320 + LRK54_RS00945 0.62 -1.1 210,320 + LRK54_RS00945 0.62 +0.7 210,320 + LRK54_RS00945 0.62 +0.5 210,320 + LRK54_RS00945 0.62 -0.7 210,320 + LRK54_RS00945 0.62 -0.3 210,320 + LRK54_RS00945 0.62 -1.7 210,320 + LRK54_RS00945 0.62 -0.4 210,320 + LRK54_RS00945 0.62 +1.9 210,320 + LRK54_RS00945 0.62 +1.0 210,320 + LRK54_RS00945 0.62 +1.9 210,320 + LRK54_RS00945 0.62 +1.9 210,320 + LRK54_RS00945 0.62 +0.3 210,320 + LRK54_RS00945 0.62 -0.7 210,320 + LRK54_RS00945 0.62 -2.0 210,320 + LRK54_RS00945 0.62 -0.5 210,320 + LRK54_RS00945 0.62 -0.8 210,320 + LRK54_RS00945 0.62 +0.7 210,320 + LRK54_RS00945 0.62 -1.1 210,321 - LRK54_RS00945 0.62 -0.5 210,321 - LRK54_RS00945 0.62 -0.0 210,321 - LRK54_RS00945 0.62 -0.1 210,321 - LRK54_RS00945 0.62 -0.3 210,321 - LRK54_RS00945 0.62 -0.1 210,321 - LRK54_RS00945 0.62 +2.7 210,321 - LRK54_RS00945 0.62 -0.4 210,321 - LRK54_RS00945 0.62 -0.3 210,321 - LRK54_RS00945 0.62 +0.2 210,321 - LRK54_RS00945 0.62 +2.4 210,321 - LRK54_RS00945 0.62 +1.1 210,321 - LRK54_RS00945 0.62 -0.7 210,321 - LRK54_RS00945 0.62 +0.5 210,506 + LRK54_RS00945 0.81 -0.7 210,506 + LRK54_RS00945 0.81 +0.6 210,506 + LRK54_RS00945 0.81 -1.7 210,506 + LRK54_RS00945 0.81 +2.9 210,506 + LRK54_RS00945 0.81 -1.2 210,506 + LRK54_RS00945 0.81 +2.3 210,506 + LRK54_RS00945 0.81 +0.3 210,506 + LRK54_RS00945 0.81 +1.0 210,506 + LRK54_RS00945 0.81 +0.1 210,506 + LRK54_RS00945 0.81 +2.5 210,506 + LRK54_RS00945 0.81 -0.1 210,506 + LRK54_RS00945 0.81 +0.4 210,506 + LRK54_RS00945 0.81 -0.6 210,506 + LRK54_RS00945 0.81 +0.7 210,506 + LRK54_RS00945 0.81 +0.9 210,506 + LRK54_RS00945 0.81 +1.4 210,506 + LRK54_RS00945 0.81 +0.3 210,506 + LRK54_RS00945 0.81 +0.1 210,506 + LRK54_RS00945 0.81 +0.3 210,506 + LRK54_RS00945 0.81 -0.3 210,506 + LRK54_RS00945 0.81 +1.4 210,506 + LRK54_RS00945 0.81 -0.5 210,506 + LRK54_RS00945 0.81 +0.3 210,506 + LRK54_RS00945 0.81 -0.5 210,506 + LRK54_RS00945 0.81 -3.1 210,506 + LRK54_RS00945 0.81 +2.9 210,506 + LRK54_RS00945 0.81 +1.4 210,506 + LRK54_RS00945 0.81 -0.9 210,506 + LRK54_RS00945 0.81 +0.3 210,506 + LRK54_RS00945 0.81 +0.0 210,506 + LRK54_RS00945 0.81 -0.4 210,506 + LRK54_RS00945 0.81 +0.5 210,506 + LRK54_RS00945 0.81 +0.9 210,506 + LRK54_RS00945 0.81 -1.1 210,506 + LRK54_RS00945 0.81 +0.9 210,506 + LRK54_RS00945 0.81 +2.6 210,506 + LRK54_RS00945 0.81 +2.2 210,506 + LRK54_RS00945 0.81 -0.1 210,506 + LRK54_RS00945 0.81 -1.3 210,506 + LRK54_RS00945 0.81 -0.5 210,506 + LRK54_RS00945 0.81 +1.4 210,506 + LRK54_RS00945 0.81 +1.3 210,507 - LRK54_RS00945 0.81 +0.5 210,507 - LRK54_RS00945 0.81 -0.7 210,507 - LRK54_RS00945 0.81 -1.1 210,507 - LRK54_RS00945 0.81 -0.0 210,507 - LRK54_RS00945 0.81 +2.3 210,507 - LRK54_RS00945 0.81 -1.4 210,507 - LRK54_RS00945 0.81 +0.4 210,507 - LRK54_RS00945 0.81 -0.5 210,507 - LRK54_RS00945 0.81 +0.4 210,507 - LRK54_RS00945 0.81 -0.7 210,507 - LRK54_RS00945 0.81 -0.1 210,507 - LRK54_RS00945 0.81 -0.6 210,507 - LRK54_RS00945 0.81 +0.4 210,507 - LRK54_RS00945 0.81 -1.1 210,507 - LRK54_RS00945 0.81 -0.5 210,507 - LRK54_RS00945 0.81 +3.4 210,507 - LRK54_RS00945 0.81 +0.9 210,507 - LRK54_RS00945 0.81 +0.2 210,507 - LRK54_RS00945 0.81 +0.6 210,507 - LRK54_RS00945 0.81 -0.7 210,507 - LRK54_RS00945 0.81 +0.2 210,507 - LRK54_RS00945 0.81 +0.6 210,507 - LRK54_RS00945 0.81 +0.5 210,507 - LRK54_RS00945 0.81 +0.7 210,507 - LRK54_RS00945 0.81 +1.3 210,507 - LRK54_RS00945 0.81 +0.4 210,518 + LRK54_RS00945 0.82 -0.1 210,518 + LRK54_RS00945 0.82 +0.7 210,518 + LRK54_RS00945 0.82 +0.0 210,518 + LRK54_RS00945 0.82 +2.4 210,518 + LRK54_RS00945 0.82 -0.5 210,519 - LRK54_RS00945 0.82 -0.9 210,519 - LRK54_RS00945 0.82 -0.2 210,519 - LRK54_RS00945 0.82 -2.3 210,519 - LRK54_RS00945 0.82 -1.9 210,542 + LRK54_RS00945 0.85 -1.3 210,542 + LRK54_RS00945 0.85 -0.7 210,543 - LRK54_RS00945 0.85 +0.9 210,683 + -1.1 210,683 + -0.9 210,683 + -0.9 210,683 + -0.7 210,683 + -0.6 210,683 + -0.7 210,683 + -0.9 210,683 + -0.6 210,684 - -1.4 210,684 - -0.1 210,684 - -0.5 210,684 - -0.1 210,684 - -0.6 210,800 + -1.3 210,800 + -0.5 210,800 + -0.2 210,800 + -0.7 210,800 + +0.3 210,800 + -2.1 210,800 + -0.1 210,800 + +0.5 210,800 + -2.1 210,801 - -1.3 210,801 - -1.4 210,801 - -1.5 210,801 - -0.5 210,801 - -0.9 210,877 + -0.6 210,877 + -0.3 210,877 + +0.3 210,877 + -2.3 210,877 + +0.3 210,877 + -0.5 210,877 + -1.5 210,877 + -0.1 210,877 + -1.6 210,877 + -0.1 210,877 + -0.2 210,877 + +0.5 210,877 + -1.0 210,877 + -1.1 210,877 + -0.8 210,878 - -1.7 210,879 + -1.9 210,879 + -1.5 210,879 + -0.1 210,879 + +1.4 210,879 + +0.3 210,879 + +0.3 210,879 + -0.1 210,879 + -1.3 210,879 + +0.3 213,841 + -0.6 213,841 + -0.0 213,841 + -1.3 213,841 + -0.3 213,841 + +0.1 213,841 + -0.8
Or see this region's nucleotide sequence