Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_4084

Experiment: benzoic 0.145 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	benzoic 0.145 mg/ml
4,218,485	+		Ga0059261_4083	0.41	+0.7
4,218,486	-				+2.5
4,218,486	-		Ga0059261_4083	0.42	-0.4
4,218,615	+				-0.5
4,218,616	-		Ga0059261_4083	0.59	-0.1
4,218,616	-		Ga0059261_4083	0.59	+0.2
4,218,616	-		Ga0059261_4083	0.59	-0.5
4,218,622	+		Ga0059261_4083	0.60	+0.6
4,218,622	+		Ga0059261_4083	0.60	+0.7
4,218,623	-		Ga0059261_4083	0.60	+0.1
4,218,623	-		Ga0059261_4083	0.60	-0.3
4,218,816	+		Ga0059261_4083	0.86	+0.1
4,218,896	+				+0.6
4,218,897	-				-0.9
4,218,897	-				-0.6
4,218,897	-				+0.3
4,218,935	+				-0.0
4,218,935	+				-0.8
4,218,941	+				+0.1
4,218,945	+				+0.1
4,219,021	+				+0.9
4,219,021	+				-2.1
4,219,022	-				-0.0
4,219,072	-				+0.1
4,219,088	+				+0.0
4,219,112	+				-0.2
4,219,113	-				+0.3
4,219,113	-				+0.5
4,219,113	-				-0.9
4,219,118	+				-0.3
4,219,132	+				+0.6
4,219,241	-				+0.5
4,219,285	+				+0.2
4,219,286	-				-0.4
4,219,324	+				+0.1
4,219,324	+				+0.2
4,219,325	-				-0.2
4,219,325	-				-0.3
4,219,349	+				+0.4
4,219,349	+				-0.1
4,219,349	+				-1.3
4,219,353	+				+0.2
4,219,418	+				+0.8
4,219,537	-				-0.4
4,219,616	+		Ga0059261_4084	0.15	+0.6
4,219,616	+		Ga0059261_4084	0.15	+0.1
4,219,617	-		Ga0059261_4084	0.16	+0.7
4,219,617	-				+0.9
4,219,792	+		Ga0059261_4084	0.31	+0.3
4,219,792	+		Ga0059261_4084	0.31	+0.3
4,219,793	-		Ga0059261_4084	0.31	+0.6
4,219,793	-		Ga0059261_4084	0.31	+0.2
4,219,866	+		Ga0059261_4084	0.37	-0.2
4,219,866	+		Ga0059261_4084	0.37	+0.6
4,219,867	-		Ga0059261_4084	0.37	-0.0
4,219,896	+		Ga0059261_4084	0.40	+1.1
4,220,034	+		Ga0059261_4084	0.52	+0.6
4,220,034	+		Ga0059261_4084	0.52	+0.1
4,220,034	+		Ga0059261_4084	0.52	+0.2
4,220,035	-		Ga0059261_4084	0.52	-0.1
4,220,177	-		Ga0059261_4084	0.64	+0.0
4,220,304	+		Ga0059261_4084	0.75	-0.8
4,220,313	+		Ga0059261_4084	0.76	+0.6
4,220,313	+		Ga0059261_4084	0.76	+0.3
4,220,314	-		Ga0059261_4084	0.76	+1.2
4,220,314	-		Ga0059261_4084	0.76	-0.0
4,220,314	-		Ga0059261_4084	0.76	+0.4
4,220,314	-		Ga0059261_4084	0.76	-0.6
4,220,314	-		Ga0059261_4084	0.76	-0.3
4,220,314	-		Ga0059261_4084	0.76	-0.4
4,220,314	-		Ga0059261_4084	0.76	-2.3
4,220,314	-		Ga0059261_4084	0.76	-0.1
4,220,326	+		Ga0059261_4084	0.77	+0.1
4,220,326	+		Ga0059261_4084	0.77	-0.3
4,220,327	-		Ga0059261_4084	0.77	+0.1
4,220,327	-		Ga0059261_4084	0.77	-1.8
4,220,327	-		Ga0059261_4084	0.77	+0.5
4,220,327	-		Ga0059261_4084	0.77	-0.0
4,220,327	-		Ga0059261_4084	0.77	+0.5
4,220,384	-		Ga0059261_4084	0.82	+0.2
4,220,483	+				-0.1
4,220,483	+				-0.4
4,220,483	+				+1.0
4,220,484	-				-0.3
4,220,484	-				+0.0
4,220,484	-				+0.3
4,220,484	-				+0.3
4,220,583	+				-0.2
4,220,583	+				+0.2
4,220,583	+				-0.2
4,220,583	+				-0.1
4,220,583	+				+0.3
4,220,583	+				-0.0
4,220,583	+				-0.6
4,220,584	-				+0.1
4,220,584	-				+0.1
4,220,584	-				-0.2
4,220,682	+		Ga0059261_4085	0.13	-1.0
4,220,683	-		Ga0059261_4085	0.13	-0.1
4,220,735	+		Ga0059261_4085	0.21	-0.5
4,220,735	+		Ga0059261_4085	0.21	-0.0
4,220,735	+		Ga0059261_4085	0.21	-0.0
4,220,736	-		Ga0059261_4085	0.21	-1.5
4,220,796	+		Ga0059261_4085	0.29	-0.1
4,220,796	+		Ga0059261_4085	0.29	+0.3
4,220,796	+		Ga0059261_4085	0.29	+0.6
4,220,797	-		Ga0059261_4085	0.30	-0.2
4,220,797	-		Ga0059261_4085	0.30	+0.0
4,220,893	-		Ga0059261_4085	0.43	-0.3
4,221,057	+		Ga0059261_4085	0.66	+0.1
4,221,057	+		Ga0059261_4085	0.66	+0.3
4,221,185	+		Ga0059261_4085	0.84	-0.0
4,221,185	+		Ga0059261_4085	0.84	-0.8
4,221,186	-		Ga0059261_4085	0.84	+0.4
4,221,186	-		Ga0059261_4085	0.84	+0.9
4,221,240	+				+0.1
4,221,240	+				-0.0
4,221,240	+				+0.1
4,221,240	+				+0.1
4,221,240	+				+0.3
4,221,240	+				+0.4
4,221,240	+				+0.2
4,221,240	+				-0.3
4,221,241	-				-0.0
4,221,241	-				-0.5
4,221,241	-				-0.0
4,221,241	-				-0.1
4,221,241	-				-0.8
4,221,241	-				-0.1
4,221,241	-				-0.2
4,221,241	-				+0.7
4,221,256	-				+0.2
4,221,256	-				-0.1
4,221,295	+				-1.7
4,221,296	-				+0.0
4,221,508	+		Ga0059261_4086	0.21	-0.0
4,221,508	+		Ga0059261_4086	0.21	+0.7
4,221,508	+		Ga0059261_4086	0.21	+0.3
4,221,509	-		Ga0059261_4086	0.21	-0.1
4,221,509	-		Ga0059261_4086	0.21	-0.2
4,221,509	-		Ga0059261_4086	0.21	+0.7