Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3238

Experiment: benzoic 0.145 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	benzoic 0.145 mg/ml
3,371,698	+				+0.8
3,371,741	-				-0.4
3,371,741	-				+0.2
3,371,780	-				+0.4
3,371,840	+				-1.1
3,371,840	+				+0.6
3,371,841	-				+0.2
3,372,016	+				-0.6
3,372,016	+				+1.1
3,372,016	+				+0.1
3,372,017	-				-0.2
3,372,032	+				+0.4
3,372,032	+				-0.0
3,372,127	+				-0.5
3,372,127	+				-0.4
3,372,151	+				-0.3
3,372,151	+				-0.6
3,372,151	+				-0.2
3,372,151	+				+1.3
3,372,152	-				-0.8
3,372,152	-				+0.2
3,372,152	-				+0.0
3,372,152	-				-0.6
3,372,167	+				-0.4
3,372,167	+				-0.2
3,372,168	-				-0.5
3,372,168	-				-1.2
3,372,168	-				-0.0
3,372,208	+				-0.0
3,372,209	-				-0.0
3,372,221	+				+0.2
3,372,250	+				-0.2
3,372,253	+				+0.3
3,372,253	+				-0.0
3,372,253	+				-0.2
3,372,253	+				-0.8
3,372,253	+				+1.3
3,372,253	+				-1.8
3,372,253	+				-0.3
3,372,253	+				-0.0
3,372,253	+				-0.2
3,372,253	+				-0.3
3,372,253	+				+0.2
3,372,254	-				-0.6
3,372,254	-				+1.0
3,372,254	-				-0.4
3,372,254	-				+0.3
3,372,254	-				+0.5
3,372,254	-				+0.4
3,372,254	-				-1.8
3,372,254	-				-0.3
3,372,255	+				+0.0
3,372,255	+				-0.3
3,372,255	+				-0.2
3,372,255	+				-0.7
3,372,256	-				+0.1
3,372,256	-				+0.1
3,372,256	-				-0.4
3,372,256	-				-0.4
3,372,256	-				-0.4
3,372,256	-				+0.6
3,372,256	-				-0.5
3,372,256	-				-0.2
3,372,256	-				-0.2
3,372,337	+				-0.3
3,372,337	+				-0.2
3,372,338	-				-0.6
3,372,338	-				-0.6
3,372,338	-				+0.2
3,372,338	-				-0.2
3,372,343	+				+0.4
3,372,343	+				-0.0
3,372,343	+				-0.3
3,372,343	+				-0.3
3,372,343	+				-0.2
3,372,343	+				-0.2
3,372,343	+				-0.0
3,372,343	+				-0.8
3,372,344	-				+0.6
3,372,344	-				-0.7
3,372,344	-				-0.2
3,372,344	-				-0.7
3,372,344	-				+0.2
3,372,414	+				+0.1
3,372,414	+				-0.0
3,372,415	-				-0.3
3,372,415	-				-0.7
3,372,415	-				-0.3
3,372,415	-				+0.0
3,372,518	+				+0.3
3,372,519	-				-0.8
3,372,534	-				-0.4
3,372,534	-				-0.9
3,372,534	-				-0.0
3,372,629	+		Ga0059261_3238	0.41	+0.5
3,372,629	+		Ga0059261_3238	0.41	+0.5
3,372,629	+		Ga0059261_3238	0.41	+0.3
3,372,659	+		Ga0059261_3238	0.54	-0.1
3,372,779	+				-0.2
3,372,779	+				+1.2
3,372,779	+				+0.5
3,372,779	+				-0.3
3,372,780	-				+0.1
3,372,780	-				+0.0
3,372,780	-				-0.3
3,372,831	+				+0.0
3,372,893	+				-0.4
3,372,893	+				+0.6
3,372,893	+				+0.8
3,372,893	+				+0.2
3,372,893	+				+0.1
3,372,893	+				-0.3
3,372,894	-				+1.0
3,372,894	-				+0.1
3,372,894	-				+0.1
3,372,894	-				+0.4
3,372,894	-				-0.2
3,372,894	-				+1.4
3,372,894	-				-0.2
3,373,029	+		Ga0059261_3239	0.20	+0.3
3,373,030	-		Ga0059261_3239	0.20	+0.0
3,373,030	-		Ga0059261_3239	0.20	-0.8
3,373,226	-		Ga0059261_3239	0.40	-0.0
3,373,226	-		Ga0059261_3239	0.40	-1.9
3,373,320	+		Ga0059261_3239	0.49	-1.3
3,373,320	+		Ga0059261_3239	0.49	-0.2
3,373,320	+		Ga0059261_3239	0.49	-0.5
3,373,321	-		Ga0059261_3239	0.49	+0.3
3,373,321	-		Ga0059261_3239	0.49	+0.3
3,373,321	-		Ga0059261_3239	0.49	+0.3
3,373,321	-		Ga0059261_3239	0.49	-0.6
3,373,321	-		Ga0059261_3239	0.49	+1.0
3,373,338	+		Ga0059261_3239	0.51	+0.5
3,373,339	-		Ga0059261_3239	0.51	+0.3
3,373,339	-		Ga0059261_3239	0.51	-0.1
3,373,371	+		Ga0059261_3239	0.54	+0.3
3,373,371	+		Ga0059261_3239	0.54	-0.4
3,373,371	+		Ga0059261_3239	0.54	-0.0
3,373,371	+		Ga0059261_3239	0.54	-0.5
3,373,371	+		Ga0059261_3239	0.54	+0.8
3,373,372	-		Ga0059261_3239	0.54	-0.2
3,373,372	-		Ga0059261_3239	0.54	-0.4
3,373,372	-		Ga0059261_3239	0.54	-0.2
3,373,372	-		Ga0059261_3239	0.54	+0.7
3,373,372	-		Ga0059261_3239	0.54	-0.3
3,373,413	+		Ga0059261_3239	0.58	+0.8
3,373,413	+		Ga0059261_3239	0.58	-0.0
3,373,413	+		Ga0059261_3239	0.58	+1.1
3,373,413	+		Ga0059261_3239	0.58	-0.9
3,373,414	-		Ga0059261_3239	0.58	-0.3
3,373,414	-		Ga0059261_3239	0.58	-0.2
3,373,414	-		Ga0059261_3239	0.58	-0.2
3,373,479	+		Ga0059261_3239	0.65	+0.6
3,373,479	+		Ga0059261_3239	0.65	+0.3
3,373,479	+		Ga0059261_3239	0.65	-0.3
3,373,479	+		Ga0059261_3239	0.65	+1.3
3,373,479	+		Ga0059261_3239	0.65	+0.2
3,373,479	+		Ga0059261_3239	0.65	+0.1
3,373,480	-		Ga0059261_3239	0.65	+1.0
3,373,480	-		Ga0059261_3239	0.65	-0.1
3,373,480	-		Ga0059261_3239	0.65	-0.7
3,373,480	-		Ga0059261_3239	0.65	+0.1
3,373,480	-		Ga0059261_3239	0.65	-0.1
3,373,480	-		Ga0059261_3239	0.65	+0.5
3,373,480	-		Ga0059261_3239	0.65	-1.2
3,373,485	+		Ga0059261_3239	0.66	-0.0
3,373,485	+		Ga0059261_3239	0.66	+0.8
3,373,485	+		Ga0059261_3239	0.66	-0.1
3,373,485	+		Ga0059261_3239	0.66	+0.1
3,373,485	+		Ga0059261_3239	0.66	-0.1
3,373,485	+		Ga0059261_3239	0.66	-0.2
3,373,485	+		Ga0059261_3239	0.66	-0.6
3,373,486	-		Ga0059261_3239	0.66	+0.3
3,373,486	-		Ga0059261_3239	0.66	-0.2
3,373,486	-		Ga0059261_3239	0.66	+0.3
3,373,486	-		Ga0059261_3239	0.66	-0.3
3,373,486	-		Ga0059261_3239	0.66	-0.4
3,373,486	-		Ga0059261_3239	0.66	+0.9
3,373,486	-		Ga0059261_3239	0.66	-0.4
3,373,486	-		Ga0059261_3239	0.66	-0.1
3,373,486	-		Ga0059261_3239	0.66	+0.0
3,373,486	-		Ga0059261_3239	0.66	-0.1
3,373,486	-		Ga0059261_3239	0.66	-0.4
3,373,486	-		Ga0059261_3239	0.66	-0.2
3,373,553	+		Ga0059261_3239	0.72	-0.2
3,373,553	+		Ga0059261_3239	0.72	-0.0
3,373,554	-		Ga0059261_3239	0.72	+0.4
3,373,582	+		Ga0059261_3239	0.75	-0.4
3,373,725	+		Ga0059261_3239	0.90	-0.1
3,373,725	+		Ga0059261_3239	0.90	-0.6
3,373,725	+		Ga0059261_3239	0.90	+0.1
3,373,725	+		Ga0059261_3239	0.90	+0.7
3,373,725	+		Ga0059261_3239	0.90	-1.0
3,373,725	+		Ga0059261_3239	0.90	+1.0
3,373,725	+		Ga0059261_3239	0.90	-1.3
3,373,726	-		Ga0059261_3239	0.90	-0.6
3,373,726	-		Ga0059261_3239	0.90	+0.5
3,373,726	-		Ga0059261_3239	0.90	-0.1
3,373,726	-		Ga0059261_3239	0.90	-0.3
3,373,726	-		Ga0059261_3239	0.90	+0.5
3,373,726	-		Ga0059261_3239	0.90	-0.5
3,373,726	-		Ga0059261_3239	0.90	-0.1
3,373,726	-		Ga0059261_3239	0.90	+0.2