Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2897

Experiment: benzoic 0.145 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	benzoic 0.145 mg/ml
3,004,701	+		Ga0059261_2896	0.48	-0.5
3,004,701	+		Ga0059261_2896	0.48	-0.7
3,004,701	+		Ga0059261_2896	0.48	+0.5
3,004,701	+		Ga0059261_2896	0.48	-0.5
3,004,702	-		Ga0059261_2896	0.48	-0.1
3,004,702	-		Ga0059261_2896	0.48	+0.1
3,004,721	-		Ga0059261_2896	0.51	-1.0
3,004,750	+		Ga0059261_2896	0.56	-0.4
3,004,771	+		Ga0059261_2896	0.59	+0.6
3,004,771	+				+1.6
3,004,771	+		Ga0059261_2896	0.59	-0.7
3,004,771	+		Ga0059261_2896	0.59	-0.8
3,004,771	+		Ga0059261_2896	0.59	-0.5
3,004,772	-		Ga0059261_2896	0.59	+0.1
3,004,772	-		Ga0059261_2896	0.59	-1.1
3,004,772	-		Ga0059261_2896	0.59	-0.6
3,004,772	-		Ga0059261_2896	0.59	+0.1
3,004,772	-		Ga0059261_2896	0.59	-1.0
3,004,772	-		Ga0059261_2896	0.59	-0.0
3,004,772	-		Ga0059261_2896	0.59	+0.4
3,004,772	-		Ga0059261_2896	0.59	-0.7
3,004,772	-		Ga0059261_2896	0.59	+0.1
3,004,772	-		Ga0059261_2896	0.59	-0.1
3,004,772	-		Ga0059261_2896	0.59	-0.7
3,004,773	+		Ga0059261_2896	0.59	-0.8
3,004,773	+		Ga0059261_2896	0.59	-0.1
3,004,773	+		Ga0059261_2896	0.59	-0.0
3,004,773	+		Ga0059261_2896	0.59	-0.2
3,004,773	+		Ga0059261_2896	0.59	-0.0
3,004,773	+		Ga0059261_2896	0.59	-0.5
3,004,773	+		Ga0059261_2896	0.59	-0.1
3,004,773	+		Ga0059261_2896	0.59	-0.3
3,004,773	+				+0.3
3,004,774	-		Ga0059261_2896	0.59	-0.7
3,004,774	-		Ga0059261_2896	0.59	+0.5
3,004,774	-		Ga0059261_2896	0.59	+1.2
3,004,774	-		Ga0059261_2896	0.59	-1.0
3,004,792	+		Ga0059261_2896	0.62	-0.4
3,004,793	-		Ga0059261_2896	0.62	+0.2
3,004,793	-		Ga0059261_2896	0.62	-0.1
3,004,802	-		Ga0059261_2896	0.64	+0.0
3,004,802	-		Ga0059261_2896	0.64	-0.4
3,004,802	-		Ga0059261_2896	0.64	-0.3
3,004,802	-		Ga0059261_2896	0.64	-0.5
3,004,843	+		Ga0059261_2896	0.70	+1.0
3,004,843	+		Ga0059261_2896	0.70	-0.3
3,004,844	-		Ga0059261_2896	0.70	+0.2
3,004,844	-		Ga0059261_2896	0.70	-0.0
3,004,844	-		Ga0059261_2896	0.70	+0.7
3,004,844	-		Ga0059261_2896	0.70	-0.0
3,005,052	+				-0.1
3,005,052	+				+2.0
3,005,053	-				+0.5
3,005,053	-				-0.4
3,005,053	-				+0.2
3,005,053	-				-0.8
3,005,063	+				+1.5
3,005,177	+				+0.4
3,005,178	-				-0.5
3,005,178	-				+0.2
3,005,178	-				+0.3
3,005,227	+				+0.4
3,005,227	+				-0.3
3,005,612	+		Ga0059261_2897	0.49	+0.5
3,005,612	+				+0.6
3,005,612	+		Ga0059261_2897	0.49	-2.1
3,005,612	+		Ga0059261_2897	0.49	+0.5
3,005,612	+		Ga0059261_2897	0.49	+0.6
3,005,612	+		Ga0059261_2897	0.49	+0.5
3,005,613	-		Ga0059261_2897	0.49	+1.4
3,005,613	-		Ga0059261_2897	0.49	-1.0
3,005,614	-		Ga0059261_2897	0.50	+1.2
3,005,780	+				+0.0
3,005,780	+				-0.5
3,005,780	+				+0.4
3,005,781	-				+0.2
3,005,781	-				-0.7
3,005,781	-				+0.5
3,005,781	-				-0.1
3,005,781	-				+0.1
3,005,782	+				-0.4
3,005,782	+				-0.3
3,005,782	+				+0.8
3,005,782	+				-0.6
3,005,782	+				+0.3
3,005,782	+				+0.2
3,005,782	+				-1.0
3,005,782	+				-0.8
3,005,782	+				-0.7
3,005,782	+				+0.1
3,005,782	+				+0.5
3,005,782	+				+0.5
3,005,782	+				+1.6
3,005,783	-				+0.1
3,005,783	-				-1.3
3,005,783	-				+0.6
3,005,783	-				-0.2
3,005,783	-				+1.0
3,005,783	-				-0.2
3,005,783	-				-0.3
3,005,783	-				-0.0
3,005,901	+				-0.4
3,005,901	+				+0.5
3,005,901	+				+0.3
3,005,901	+				-1.3
3,005,902	-				+0.2
3,005,902	-				-0.2
3,005,902	-				-0.4
3,005,910	+				+0.3
3,005,911	-				-1.2
3,005,911	-				-0.2
3,005,930	+				-0.0
3,005,931	-				-0.7
3,005,931	-				-0.3
3,005,935	+				-0.3
3,005,936	-				+0.3
3,005,936	-				+0.2
3,005,952	+				+0.0
3,005,953	-				-0.5
3,006,021	+				-0.4
3,006,022	-				-0.3
3,006,022	-				-1.2
3,006,181	-				-2.3
3,006,313	+		Ga0059261_2898	0.11	-0.7
3,006,314	-		Ga0059261_2898	0.11	-0.2
3,006,407	-		Ga0059261_2898	0.15	-0.3
3,006,407	-		Ga0059261_2898	0.15	-0.4
3,006,407	-		Ga0059261_2898	0.15	-0.1
3,006,423	+		Ga0059261_2898	0.16	-0.1
3,006,423	+				+2.6
3,006,423	+		Ga0059261_2898	0.16	+0.3
3,006,423	+		Ga0059261_2898	0.16	-2.4
3,006,424	-		Ga0059261_2898	0.16	+0.5
3,006,424	-		Ga0059261_2898	0.16	-0.1
3,006,424	-		Ga0059261_2898	0.16	+0.6
3,006,424	-		Ga0059261_2898	0.16	+0.3
3,006,454	+		Ga0059261_2898	0.18	+0.1
3,006,455	-		Ga0059261_2898	0.18	+0.1
3,006,559	+		Ga0059261_2898	0.23	+0.4
3,006,559	+		Ga0059261_2898	0.23	-0.7
3,006,559	+		Ga0059261_2898	0.23	+0.0
3,006,559	+		Ga0059261_2898	0.23	+1.3
3,006,559	+		Ga0059261_2898	0.23	+1.0
3,006,559	+		Ga0059261_2898	0.23	+0.3
3,006,559	+		Ga0059261_2898	0.23	+1.0
3,006,560	-		Ga0059261_2898	0.23	-1.0
3,006,560	-		Ga0059261_2898	0.23	-1.2
3,006,560	-				-0.4
3,006,649	+		Ga0059261_2898	0.28	+0.5
3,006,649	+		Ga0059261_2898	0.28	+0.3
3,006,649	+		Ga0059261_2898	0.28	-0.3
3,006,649	+				+1.6
3,006,649	+		Ga0059261_2898	0.28	+0.4
3,006,650	-		Ga0059261_2898	0.28	-2.0
3,006,650	-		Ga0059261_2898	0.28	+0.3
3,006,650	-		Ga0059261_2898	0.28	-0.6
3,006,650	-		Ga0059261_2898	0.28	+0.6
3,006,650	-		Ga0059261_2898	0.28	-0.6
3,006,651	+		Ga0059261_2898	0.28	-0.0
3,006,651	+		Ga0059261_2898	0.28	+0.4
3,006,651	+		Ga0059261_2898	0.28	+0.5
3,006,651	+		Ga0059261_2898	0.28	-0.7
3,006,651	+		Ga0059261_2898	0.28	+0.1
3,006,652	-		Ga0059261_2898	0.28	+0.2
3,006,652	-		Ga0059261_2898	0.28	-1.0
3,006,652	-		Ga0059261_2898	0.28	+0.3
3,006,652	-		Ga0059261_2898	0.28	-0.4
3,006,652	-		Ga0059261_2898	0.28	+1.0
3,006,675	+		Ga0059261_2898	0.29	-0.4
3,006,675	+		Ga0059261_2898	0.29	+0.2
3,006,675	+		Ga0059261_2898	0.29	+0.3
3,006,675	+		Ga0059261_2898	0.29	-0.2
3,006,675	+		Ga0059261_2898	0.29	-0.5
3,006,675	+		Ga0059261_2898	0.29	+0.6
3,006,675	+		Ga0059261_2898	0.29	+0.8
3,006,675	+		Ga0059261_2898	0.29	+0.0
3,006,675	+		Ga0059261_2898	0.29	+0.7
3,006,675	+		Ga0059261_2898	0.29	-0.1
3,006,675	+		Ga0059261_2898	0.29	+0.8
3,006,675	+		Ga0059261_2898	0.29	-0.1
3,006,675	+		Ga0059261_2898	0.29	+0.8
3,006,676	-		Ga0059261_2898	0.29	+0.9
3,006,676	-		Ga0059261_2898	0.29	-0.2
3,006,676	-		Ga0059261_2898	0.29	-0.3
3,006,676	-		Ga0059261_2898	0.29	-0.3
3,006,676	-		Ga0059261_2898	0.29	-1.1
3,006,676	-		Ga0059261_2898	0.29	+0.6
3,006,676	-		Ga0059261_2898	0.29	-0.3
3,006,676	-		Ga0059261_2898	0.29	-0.4
3,006,676	-		Ga0059261_2898	0.29	+0.2
3,006,676	-		Ga0059261_2898	0.29	+0.6
3,006,676	-		Ga0059261_2898	0.29	+0.6
3,006,676	-		Ga0059261_2898	0.29	-1.7
3,006,676	-		Ga0059261_2898	0.29	+1.1
3,006,676	-		Ga0059261_2898	0.29	+0.0
3,006,676	-		Ga0059261_2898	0.29	+0.4
3,006,676	-		Ga0059261_2898	0.29	-0.6
3,006,676	-		Ga0059261_2898	0.29	+0.4
3,006,677	-		Ga0059261_2898	0.29	+0.2
3,006,678	+		Ga0059261_2898	0.29	+0.3
3,006,730	+		Ga0059261_2898	0.32	-0.1
3,006,730	+		Ga0059261_2898	0.32	+0.5
3,006,730	+		Ga0059261_2898	0.32	+0.2
3,006,730	+		Ga0059261_2898	0.32	-0.1
3,006,730	+		Ga0059261_2898	0.32	-0.1
3,006,730	+		Ga0059261_2898	0.32	-0.4
3,006,731	-				-1.0
3,006,731	-		Ga0059261_2898	0.32	-2.5
3,006,731	-		Ga0059261_2898	0.32	+0.4
3,006,731	-		Ga0059261_2898	0.32	+0.2
3,006,731	-		Ga0059261_2898	0.32	-0.2
3,006,731	-		Ga0059261_2898	0.32	-0.3
3,006,731	-		Ga0059261_2898	0.32	+0.1
3,006,731	-		Ga0059261_2898	0.32	+0.3
3,006,731	-		Ga0059261_2898	0.32	+0.1
3,006,731	-		Ga0059261_2898	0.32	+0.2
3,006,732	+		Ga0059261_2898	0.32	-0.3
3,006,732	+		Ga0059261_2898	0.32	-1.0
3,006,732	+		Ga0059261_2898	0.32	-0.1
3,006,732	+		Ga0059261_2898	0.32	-0.2
3,006,732	+		Ga0059261_2898	0.32	-0.3
3,006,732	+				+2.6
3,006,732	+		Ga0059261_2898	0.32	+0.9
3,006,732	+		Ga0059261_2898	0.32	+0.3
3,006,733	-		Ga0059261_2898	0.32	-0.0
3,006,733	-		Ga0059261_2898	0.32	+0.6
3,006,733	-		Ga0059261_2898	0.32	-0.7
3,006,733	-		Ga0059261_2898	0.32	+1.2
3,006,733	-		Ga0059261_2898	0.32	+0.3
3,006,733	-		Ga0059261_2898	0.32	+0.1
3,006,733	-				+2.2