Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1838

Experiment: benzoic 0.145 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	benzoic 0.145 mg/ml
1,945,953	+		Ga0059261_1836	0.60	-0.3
1,945,953	+		Ga0059261_1836	0.60	+0.5
1,945,953	+		Ga0059261_1836	0.60	-0.5
1,945,953	+		Ga0059261_1836	0.60	-0.2
1,945,954	-		Ga0059261_1836	0.60	+1.0
1,945,954	-		Ga0059261_1836	0.60	-0.2
1,945,954	-		Ga0059261_1836	0.60	-0.3
1,945,954	-		Ga0059261_1836	0.60	+0.7
1,945,962	+		Ga0059261_1836	0.62	+0.7
1,945,962	+		Ga0059261_1836	0.62	+0.1
1,945,962	+		Ga0059261_1836	0.62	+0.4
1,945,962	+		Ga0059261_1836	0.62	-1.0
1,945,963	-		Ga0059261_1836	0.63	-0.2
1,945,963	-		Ga0059261_1836	0.63	+0.2
1,945,963	-		Ga0059261_1836	0.63	-0.8
1,945,963	-				+1.7
1,946,070	+				-0.3
1,946,071	-				+0.4
1,946,071	-				-0.3
1,946,071	-				+0.6
1,946,098	+				+0.2
1,946,098	+				+0.1
1,946,098	+				-0.1
1,946,099	-				-0.1
1,946,099	-				+0.3
1,946,099	-				+0.2
1,946,099	-				-1.4
1,946,099	-				-0.0
1,946,099	-				-0.1
1,946,099	-				+0.1
1,946,106	+				-0.3
1,946,106	+				-0.4
1,946,106	+				-0.9
1,946,106	+				-0.2
1,946,106	+				-0.1
1,946,106	+				+0.2
1,946,106	+				-0.1
1,946,106	+				+0.5
1,946,106	+				+1.1
1,946,106	+				+0.4
1,946,107	-				+0.5
1,946,107	-				-0.3
1,946,107	-				+0.0
1,946,107	-				-0.1
1,946,107	-				+0.5
1,946,107	-				+0.4
1,946,107	-				+0.1
1,946,107	-				-0.0
1,946,107	-				-0.2
1,946,107	-				-0.1
1,946,107	-				-0.5
1,946,107	-				+0.1
1,946,188	+				-0.5
1,946,189	-				+0.1
1,946,210	-				-0.3
1,946,222	-				+1.0
1,946,514	-		Ga0059261_1837	0.57	+1.7
1,946,608	+		Ga0059261_1837	0.73	-0.4
1,946,701	-		Ga0059261_1837	0.89	+0.1
1,946,701	-		Ga0059261_1837	0.89	+0.1
1,946,769	+				-0.1
1,946,773	+				-0.7
1,946,860	+				-0.8
1,946,873	+				-0.3
1,946,873	+				-1.4
1,946,935	+		Ga0059261_1838	0.23	-2.2
1,946,935	+		Ga0059261_1838	0.23	+0.2
1,946,935	+		Ga0059261_1838	0.23	-0.4
1,946,935	+		Ga0059261_1838	0.23	-0.6
1,946,935	+		Ga0059261_1838	0.23	+1.5
1,946,935	+		Ga0059261_1838	0.23	+0.1
1,946,935	+		Ga0059261_1838	0.23	-0.9
1,946,935	+		Ga0059261_1838	0.23	-0.0
1,946,936	-		Ga0059261_1838	0.24	+0.0
1,946,936	-		Ga0059261_1838	0.24	+0.3
1,946,936	-		Ga0059261_1838	0.24	+0.7
1,946,936	-		Ga0059261_1838	0.24	+0.8
1,946,936	-		Ga0059261_1838	0.24	+1.2
1,946,936	-		Ga0059261_1838	0.24	-0.4
1,946,936	-		Ga0059261_1838	0.24	-0.5
1,946,936	-		Ga0059261_1838	0.24	+0.2
1,946,936	-		Ga0059261_1838	0.24	+0.2
1,947,030	+		Ga0059261_1838	0.69	-0.6
1,947,030	+		Ga0059261_1838	0.69	+0.1
1,947,030	+		Ga0059261_1838	0.69	+0.5
1,947,031	-		Ga0059261_1838	0.69	+0.3
1,947,031	-		Ga0059261_1838	0.69	+0.5
1,947,031	-		Ga0059261_1838	0.69	+0.9
1,947,031	-		Ga0059261_1838	0.69	+0.9
1,947,093	+				-0.2
1,947,093	+				-0.5
1,947,093	+				+0.1
1,947,093	+				-0.0
1,947,093	+				+0.1
1,947,093	+				+0.3
1,947,093	+				+0.4
1,947,093	+				+0.6
1,947,093	+				-0.3
1,947,094	-				-0.5
1,947,094	-				+0.5
1,947,094	-				-0.4
1,947,094	-				-0.1
1,947,094	-				-2.0
1,947,292	+				-0.3
1,947,369	+				-0.5
1,947,490	+				-0.3
1,947,490	+				+0.1
1,947,490	+				-0.6
1,947,491	-				-0.3
1,947,491	-				-0.2
1,947,491	-				-0.3
1,947,700	+		Ga0059261_1839	0.64	-1.0
1,947,700	+		Ga0059261_1839	0.64	-0.9
1,947,700	+		Ga0059261_1839	0.64	+0.1
1,947,700	+		Ga0059261_1839	0.64	+0.7
1,947,700	+		Ga0059261_1839	0.64	+0.0
1,947,700	+		Ga0059261_1839	0.64	+0.4
1,947,701	-		Ga0059261_1839	0.65	+0.1
1,947,701	-		Ga0059261_1839	0.65	-0.2
1,947,702	-		Ga0059261_1839	0.65	-2.3
1,947,733	+		Ga0059261_1839	0.77	+0.2
1,947,734	-		Ga0059261_1839	0.77	-0.6
1,947,795	-				+0.1
1,947,816	+				-1.3
1,947,816	+				+0.7
1,947,817	-				+1.0
1,947,817	-				-0.8
1,947,817	-				-0.9
1,947,817	-				+0.8
1,947,845	+				+0.3
1,947,846	-				+0.3
1,947,855	+				+0.3
1,947,919	+		Ga0059261_1840	0.21	+0.1
1,947,919	+		Ga0059261_1840	0.21	+0.0
1,947,919	+		Ga0059261_1840	0.21	-0.0
1,947,919	+		Ga0059261_1840	0.21	-0.0
1,947,919	+		Ga0059261_1840	0.21	-1.1
1,947,919	+				-0.3
1,947,919	+		Ga0059261_1840	0.21	+0.4
1,947,919	+				+0.7
1,947,920	-		Ga0059261_1840	0.22	+0.0
1,947,920	-		Ga0059261_1840	0.22	+0.0
1,947,920	-		Ga0059261_1840	0.22	+0.4
1,947,920	-		Ga0059261_1840	0.22	-0.2
1,947,920	-		Ga0059261_1840	0.22	+1.0
1,947,920	-		Ga0059261_1840	0.22	+0.3
1,947,953	+		Ga0059261_1840	0.38	+0.7
1,947,954	-		Ga0059261_1840	0.39	-0.1
1,947,954	-		Ga0059261_1840	0.39	-0.5
1,948,006	-		Ga0059261_1840	0.65	-0.7
1,948,006	-				+1.1
1,948,026	+		Ga0059261_1840	0.75	+0.1
1,948,026	+		Ga0059261_1840	0.75	-0.9
1,948,027	-		Ga0059261_1840	0.75	+0.5
1,948,027	-		Ga0059261_1840	0.75	-0.7