Experiment: benzoic 0.145 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0926 and Ga0059261_0927 are separated by 94 nucleotides Ga0059261_0927 and Ga0059261_0928 are separated by 64 nucleotides Ga0059261_0928 and Ga0059261_0929 are separated by 131 nucleotides
Ga0059261_0926: Ga0059261_0926 - glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase, at 959,435 to 960,019
_0926
Ga0059261_0927: Ga0059261_0927 - Domain of unknown function (DUF333), at 960,114 to 960,347
_0927
Ga0059261_0928: Ga0059261_0928 - Glyoxalase-like domain, at 960,412 to 960,789
_0928
Ga0059261_0929: Ga0059261_0929 - anthranilate phosphoribosyltransferase, at 960,921 to 961,916
_0929
Position (kb) 960
961 Strain fitness (log2 ratio) -2
-1
0
1
2 at 959.456 kb on + strand at 959.456 kb on + strand at 959.456 kb on + strand at 959.456 kb on + strand at 959.457 kb on - strand at 959.486 kb on + strand at 959.486 kb on + strand at 959.486 kb on + strand at 959.486 kb on + strand at 959.487 kb on - strand at 959.487 kb on - strand at 959.487 kb on - strand at 959.813 kb on + strand, within Ga0059261_0926 at 959.813 kb on + strand, within Ga0059261_0926 at 959.813 kb on + strand, within Ga0059261_0926 at 959.814 kb on - strand, within Ga0059261_0926 at 959.814 kb on - strand, within Ga0059261_0926 at 959.814 kb on - strand, within Ga0059261_0926 at 959.986 kb on + strand at 959.986 kb on + strand at 960.039 kb on - strand at 960.039 kb on - strand at 960.063 kb on + strand at 960.063 kb on + strand at 960.063 kb on + strand at 960.063 kb on + strand at 960.063 kb on + strand at 960.063 kb on + strand at 960.063 kb on + strand at 960.063 kb on + strand at 960.064 kb on - strand at 960.064 kb on - strand at 960.064 kb on - strand at 960.064 kb on - strand at 960.064 kb on - strand at 960.123 kb on - strand at 960.123 kb on - strand at 960.351 kb on + strand at 960.351 kb on + strand at 960.351 kb on + strand at 960.352 kb on - strand at 960.524 kb on + strand, within Ga0059261_0928 at 960.524 kb on + strand, within Ga0059261_0928 at 960.525 kb on - strand, within Ga0059261_0928 at 960.525 kb on - strand, within Ga0059261_0928 at 960.525 kb on - strand, within Ga0059261_0928 at 960.525 kb on - strand, within Ga0059261_0928 at 960.525 kb on - strand, within Ga0059261_0928 at 960.719 kb on + strand, within Ga0059261_0928 at 960.719 kb on + strand, within Ga0059261_0928 at 960.719 kb on + strand, within Ga0059261_0928 at 960.719 kb on + strand, within Ga0059261_0928 at 960.719 kb on + strand, within Ga0059261_0928 at 960.719 kb on + strand, within Ga0059261_0928 at 960.719 kb on + strand, within Ga0059261_0928 at 960.720 kb on - strand, within Ga0059261_0928 at 960.720 kb on - strand, within Ga0059261_0928 at 960.720 kb on - strand, within Ga0059261_0928 at 960.720 kb on - strand, within Ga0059261_0928 at 960.752 kb on + strand at 960.752 kb on + strand at 960.753 kb on - strand at 960.753 kb on - strand at 960.753 kb on - strand at 960.753 kb on - strand at 960.753 kb on - strand at 960.753 kb on - strand at 960.822 kb on - strand at 960.911 kb on + strand at 960.911 kb on + strand at 960.911 kb on + strand at 960.912 kb on - strand at 961.300 kb on + strand, within Ga0059261_0929 at 961.300 kb on + strand, within Ga0059261_0929 at 961.509 kb on + strand, within Ga0059261_0929 at 961.509 kb on + strand, within Ga0059261_0929 at 961.509 kb on + strand, within Ga0059261_0929 at 961.510 kb on - strand at 961.521 kb on + strand, within Ga0059261_0929 at 961.521 kb on + strand, within Ga0059261_0929 at 961.521 kb on + strand, within Ga0059261_0929 at 961.522 kb on - strand, within Ga0059261_0929 at 961.522 kb on - strand, within Ga0059261_0929 at 961.522 kb on - strand, within Ga0059261_0929 at 961.522 kb on - strand, within Ga0059261_0929
Per-strain Table
Position Strand Gene LocusTag Fraction benzoic 0.145 mg/ml remove 959,456 + +0.2 959,456 + -0.1 959,456 + -0.6 959,456 + -0.4 959,457 - -0.2 959,486 + +0.2 959,486 + -0.8 959,486 + -0.3 959,486 + -0.1 959,487 - -0.5 959,487 - -0.1 959,487 - -1.7 959,813 + Ga0059261_0926 0.65 -0.1 959,813 + Ga0059261_0926 0.65 -0.1 959,813 + Ga0059261_0926 0.65 +0.2 959,814 - Ga0059261_0926 0.65 -0.1 959,814 - Ga0059261_0926 0.65 +1.0 959,814 - Ga0059261_0926 0.65 +0.2 959,986 + +0.2 959,986 + +0.2 960,039 - -0.9 960,039 - +0.4 960,063 + +0.9 960,063 + +0.3 960,063 + -0.3 960,063 + +0.2 960,063 + +0.5 960,063 + +0.9 960,063 + +0.3 960,063 + -0.0 960,064 - +1.5 960,064 - -0.3 960,064 - +1.0 960,064 - +0.3 960,064 - -0.3 960,123 - +0.8 960,123 - +0.2 960,351 + +0.9 960,351 + +0.1 960,351 + -2.3 960,352 - +0.2 960,524 + Ga0059261_0928 0.30 -0.4 960,524 + Ga0059261_0928 0.30 +0.7 960,525 - Ga0059261_0928 0.30 +0.5 960,525 - Ga0059261_0928 0.30 -0.6 960,525 - Ga0059261_0928 0.30 +0.1 960,525 - Ga0059261_0928 0.30 +0.0 960,525 - Ga0059261_0928 0.30 -0.2 960,719 + Ga0059261_0928 0.81 +1.4 960,719 + Ga0059261_0928 0.81 -1.8 960,719 + Ga0059261_0928 0.81 +0.3 960,719 + Ga0059261_0928 0.81 +0.4 960,719 + Ga0059261_0928 0.81 +1.3 960,719 + Ga0059261_0928 0.81 +0.0 960,719 + Ga0059261_0928 0.81 -0.4 960,720 - Ga0059261_0928 0.81 -0.1 960,720 - Ga0059261_0928 0.81 +0.2 960,720 - Ga0059261_0928 0.81 +0.3 960,720 - Ga0059261_0928 0.81 +0.8 960,752 + -0.7 960,752 + +1.9 960,753 - +1.1 960,753 - +0.3 960,753 - +0.2 960,753 - -0.3 960,753 - +2.2 960,753 - -0.5 960,822 - +0.0 960,911 + -0.6 960,911 + -2.6 960,911 + -0.1 960,912 - -1.8 961,300 + Ga0059261_0929 0.38 -0.4 961,300 + Ga0059261_0929 0.38 -0.3 961,509 + Ga0059261_0929 0.59 +0.3 961,509 + Ga0059261_0929 0.59 +0.2 961,509 + Ga0059261_0929 0.59 -1.3 961,510 - +1.5 961,521 + Ga0059261_0929 0.60 -1.1 961,521 + Ga0059261_0929 0.60 +0.5 961,521 + Ga0059261_0929 0.60 -0.2 961,522 - Ga0059261_0929 0.60 -0.2 961,522 - Ga0059261_0929 0.60 -0.0 961,522 - Ga0059261_0929 0.60 -0.1 961,522 - Ga0059261_0929 0.60 -0.9
Or see this region's nucleotide sequence