Experiment: benzoic 0.145 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0142 and Ga0059261_0143 are separated by 212 nucleotides Ga0059261_0143 and Ga0059261_0144 are separated by 243 nucleotides
Ga0059261_0142: Ga0059261_0142 - Arabinose efflux permease, at 136,035 to 137,234
_0142
Ga0059261_0143: Ga0059261_0143 - hypothetical protein, at 137,447 to 137,803
_0143
Ga0059261_0144: Ga0059261_0144 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12), at 138,047 to 139,198
_0144
Position (kb) 137
138 Strain fitness (log2 ratio) -1
0
1
2 at 136.515 kb on - strand, within Ga0059261_0142 at 136.716 kb on + strand, within Ga0059261_0142 at 136.716 kb on + strand, within Ga0059261_0142 at 136.717 kb on - strand, within Ga0059261_0142 at 136.717 kb on - strand, within Ga0059261_0142 at 136.717 kb on - strand, within Ga0059261_0142 at 136.717 kb on - strand, within Ga0059261_0142 at 136.717 kb on - strand, within Ga0059261_0142 at 136.717 kb on - strand, within Ga0059261_0142 at 136.740 kb on + strand, within Ga0059261_0142 at 136.741 kb on - strand, within Ga0059261_0142 at 136.741 kb on - strand, within Ga0059261_0142 at 136.741 kb on - strand, within Ga0059261_0142 at 136.741 kb on - strand, within Ga0059261_0142 at 136.741 kb on - strand, within Ga0059261_0142 at 136.741 kb on - strand, within Ga0059261_0142 at 136.741 kb on - strand, within Ga0059261_0142 at 136.746 kb on + strand, within Ga0059261_0142 at 136.746 kb on + strand, within Ga0059261_0142 at 136.746 kb on + strand, within Ga0059261_0142 at 136.746 kb on + strand, within Ga0059261_0142 at 136.746 kb on + strand, within Ga0059261_0142 at 136.746 kb on + strand, within Ga0059261_0142 at 136.746 kb on + strand, within Ga0059261_0142 at 136.746 kb on + strand, within Ga0059261_0142 at 136.746 kb on + strand, within Ga0059261_0142 at 136.746 kb on + strand, within Ga0059261_0142 at 136.746 kb on + strand, within Ga0059261_0142 at 136.746 kb on + strand, within Ga0059261_0142 at 136.746 kb on + strand, within Ga0059261_0142 at 136.746 kb on + strand, within Ga0059261_0142 at 136.746 kb on + strand at 136.747 kb on - strand, within Ga0059261_0142 at 136.747 kb on - strand, within Ga0059261_0142 at 136.747 kb on - strand, within Ga0059261_0142 at 136.747 kb on - strand, within Ga0059261_0142 at 136.747 kb on - strand, within Ga0059261_0142 at 136.747 kb on - strand, within Ga0059261_0142 at 136.747 kb on - strand at 136.747 kb on - strand, within Ga0059261_0142 at 136.747 kb on - strand, within Ga0059261_0142 at 136.747 kb on - strand, within Ga0059261_0142 at 136.747 kb on - strand, within Ga0059261_0142 at 136.793 kb on + strand, within Ga0059261_0142 at 136.953 kb on + strand, within Ga0059261_0142 at 136.953 kb on + strand, within Ga0059261_0142 at 136.953 kb on + strand, within Ga0059261_0142 at 136.953 kb on + strand, within Ga0059261_0142 at 136.954 kb on - strand, within Ga0059261_0142 at 136.954 kb on - strand, within Ga0059261_0142 at 136.954 kb on - strand, within Ga0059261_0142 at 136.954 kb on - strand, within Ga0059261_0142 at 137.183 kb on - strand at 137.183 kb on - strand at 137.183 kb on - strand at 137.201 kb on + strand at 137.232 kb on + strand at 137.287 kb on + strand at 137.366 kb on + strand at 137.366 kb on + strand at 137.366 kb on + strand at 137.366 kb on + strand at 137.366 kb on + strand at 137.366 kb on + strand at 137.367 kb on - strand at 137.367 kb on - strand at 137.367 kb on - strand at 137.367 kb on - strand at 137.367 kb on - strand at 137.367 kb on - strand at 137.367 kb on - strand at 137.367 kb on - strand at 137.405 kb on + strand at 137.405 kb on + strand at 137.405 kb on + strand at 137.427 kb on - strand at 137.436 kb on - strand at 137.455 kb on + strand at 137.455 kb on + strand at 137.456 kb on - strand at 137.569 kb on + strand, within Ga0059261_0143 at 137.569 kb on + strand, within Ga0059261_0143 at 137.569 kb on + strand, within Ga0059261_0143 at 137.569 kb on + strand, within Ga0059261_0143 at 137.569 kb on + strand at 137.569 kb on + strand, within Ga0059261_0143 at 137.569 kb on + strand at 137.570 kb on - strand, within Ga0059261_0143 at 137.570 kb on - strand, within Ga0059261_0143 at 137.570 kb on - strand, within Ga0059261_0143 at 137.570 kb on - strand, within Ga0059261_0143 at 137.570 kb on - strand, within Ga0059261_0143 at 137.570 kb on - strand, within Ga0059261_0143 at 137.570 kb on - strand, within Ga0059261_0143 at 137.570 kb on - strand, within Ga0059261_0143 at 137.570 kb on - strand, within Ga0059261_0143 at 137.570 kb on - strand, within Ga0059261_0143 at 137.779 kb on + strand at 137.779 kb on + strand at 137.780 kb on - strand at 137.780 kb on - strand at 137.780 kb on - strand at 137.780 kb on - strand at 137.780 kb on - strand at 137.780 kb on - strand at 137.780 kb on - strand at 137.780 kb on - strand at 137.780 kb on - strand at 137.801 kb on + strand at 137.801 kb on + strand at 137.868 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction benzoic 0.145 mg/ml remove 136,515 - Ga0059261_0142 0.40 +0.0 136,716 + Ga0059261_0142 0.57 +0.0 136,716 + Ga0059261_0142 0.57 -0.1 136,717 - Ga0059261_0142 0.57 +0.7 136,717 - Ga0059261_0142 0.57 +0.4 136,717 - Ga0059261_0142 0.57 +0.1 136,717 - Ga0059261_0142 0.57 -0.2 136,717 - Ga0059261_0142 0.57 -0.5 136,717 - Ga0059261_0142 0.57 +0.3 136,740 + Ga0059261_0142 0.59 +0.6 136,741 - Ga0059261_0142 0.59 -0.7 136,741 - Ga0059261_0142 0.59 +1.2 136,741 - Ga0059261_0142 0.59 +0.0 136,741 - Ga0059261_0142 0.59 +0.3 136,741 - Ga0059261_0142 0.59 -0.2 136,741 - Ga0059261_0142 0.59 +0.5 136,741 - Ga0059261_0142 0.59 +1.8 136,746 + Ga0059261_0142 0.59 -0.5 136,746 + Ga0059261_0142 0.59 -0.5 136,746 + Ga0059261_0142 0.59 -0.0 136,746 + Ga0059261_0142 0.59 -0.0 136,746 + Ga0059261_0142 0.59 -0.7 136,746 + Ga0059261_0142 0.59 -0.5 136,746 + Ga0059261_0142 0.59 -0.1 136,746 + Ga0059261_0142 0.59 -0.2 136,746 + Ga0059261_0142 0.59 +1.0 136,746 + Ga0059261_0142 0.59 -0.6 136,746 + Ga0059261_0142 0.59 -0.3 136,746 + Ga0059261_0142 0.59 -0.7 136,746 + Ga0059261_0142 0.59 -0.8 136,746 + Ga0059261_0142 0.59 +0.1 136,746 + -0.9 136,747 - Ga0059261_0142 0.59 -0.9 136,747 - Ga0059261_0142 0.59 -0.4 136,747 - Ga0059261_0142 0.59 -0.5 136,747 - Ga0059261_0142 0.59 +0.3 136,747 - Ga0059261_0142 0.59 -0.5 136,747 - Ga0059261_0142 0.59 -0.4 136,747 - +0.7 136,747 - Ga0059261_0142 0.59 -0.9 136,747 - Ga0059261_0142 0.59 +0.4 136,747 - Ga0059261_0142 0.59 +0.8 136,747 - Ga0059261_0142 0.59 +0.3 136,793 + Ga0059261_0142 0.63 -0.5 136,953 + Ga0059261_0142 0.77 -0.1 136,953 + Ga0059261_0142 0.77 +0.0 136,953 + Ga0059261_0142 0.77 +0.7 136,953 + Ga0059261_0142 0.77 +0.3 136,954 - Ga0059261_0142 0.77 +0.1 136,954 - Ga0059261_0142 0.77 -0.8 136,954 - Ga0059261_0142 0.77 +0.5 136,954 - Ga0059261_0142 0.77 +0.6 137,183 - -1.7 137,183 - +0.7 137,183 - +0.0 137,201 + -0.6 137,232 + -0.0 137,287 + -0.8 137,366 + +0.2 137,366 + +0.7 137,366 + +1.4 137,366 + +0.4 137,366 + -0.3 137,366 + +0.2 137,367 - +0.2 137,367 - +0.4 137,367 - +0.0 137,367 - -0.6 137,367 - +0.1 137,367 - +1.5 137,367 - -0.1 137,367 - -0.4 137,405 + -0.9 137,405 + -0.7 137,405 + -1.3 137,427 - -0.1 137,436 - +0.4 137,455 + -0.1 137,455 + +0.1 137,456 - -0.1 137,569 + Ga0059261_0143 0.34 +0.3 137,569 + Ga0059261_0143 0.34 +0.8 137,569 + Ga0059261_0143 0.34 +0.2 137,569 + Ga0059261_0143 0.34 -0.2 137,569 + +1.2 137,569 + Ga0059261_0143 0.34 +0.8 137,569 + -0.3 137,570 - Ga0059261_0143 0.34 -0.4 137,570 - Ga0059261_0143 0.34 +0.0 137,570 - Ga0059261_0143 0.34 +0.5 137,570 - Ga0059261_0143 0.34 -0.1 137,570 - Ga0059261_0143 0.34 +0.0 137,570 - Ga0059261_0143 0.34 +0.4 137,570 - Ga0059261_0143 0.34 -0.2 137,570 - Ga0059261_0143 0.34 -1.3 137,570 - Ga0059261_0143 0.34 +0.5 137,570 - Ga0059261_0143 0.34 +0.6 137,779 + -0.3 137,779 + -0.4 137,780 - -0.2 137,780 - +0.5 137,780 - -0.0 137,780 - +0.2 137,780 - +0.3 137,780 - +0.1 137,780 - +0.1 137,780 - -0.5 137,780 - +0.5 137,801 + +0.5 137,801 + +0.1 137,868 + -0.7
Or see this region's nucleotide sequence