Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_29690
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
6,905,454 | - | AO356_29685 | 0.22 | -0.6 | |
6,905,642 | + | AO356_29685 | 0.44 | -0.1 | |
6,905,906 | + | AO356_29685 | 0.76 | +0.2 | |
6,905,906 | + | AO356_29685 | 0.76 | +0.0 | |
6,905,906 | + | AO356_29685 | 0.76 | +0.2 | |
6,905,907 | - | AO356_29685 | 0.76 | -0.1 | |
6,905,907 | - | AO356_29685 | 0.76 | -0.4 | |
6,905,907 | - | AO356_29685 | 0.76 | -0.3 | |
6,906,704 | + | AO356_29690 | 0.54 | -0.0 | |
6,906,737 | + | AO356_29690 | 0.58 | -0.9 | |
6,906,737 | + | AO356_29690 | 0.58 | +1.2 | |
6,906,737 | + | AO356_29690 | 0.58 | -0.2 | |
6,906,738 | - | AO356_29690 | 0.58 | +0.3 | |
6,906,822 | - | AO356_29690 | 0.68 | -0.1 | |
6,906,860 | - | AO356_29690 | 0.73 | +1.3 | |
6,906,903 | - | AO356_29690 | 0.78 | +0.5 | |
6,906,903 | - | AO356_29690 | 0.78 | +0.6 | |
6,906,964 | + | AO356_29690 | 0.85 | +0.6 | |
6,907,126 | + | -0.1 | |||
6,907,141 | - | +0.8 | |||
6,907,383 | + | AO356_29695 | 0.34 | -0.1 | |
6,907,618 | - | AO356_29695 | 0.61 | +0.3 | |
6,907,618 | - | AO356_29695 | 0.61 | -1.2 | |
6,907,758 | + | AO356_29695 | 0.77 | -0.5 | |
6,907,936 | - | -1.7 | |||
6,907,936 | - | +0.2 | |||
6,908,022 | + | -0.5 | |||
6,908,023 | - | -1.4 |
Or see this region's nucleotide sequence