Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_29160
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
6,779,940 | - | AO356_29155 | 0.42 | +0.0 | |
6,780,071 | + | AO356_29155 | 0.54 | +0.9 | |
6,780,299 | + | AO356_29155 | 0.74 | +0.1 | |
6,780,358 | - | AO356_29155 | 0.79 | -0.7 | |
6,780,441 | + | AO356_29155 | 0.87 | +0.4 | |
6,780,541 | + | -0.4 | |||
6,780,542 | - | +0.1 | |||
6,780,607 | - | -0.6 | |||
6,780,607 | - | +0.8 | |||
6,780,735 | - | +0.3 | |||
6,780,747 | + | +0.4 | |||
6,780,747 | + | +0.3 | |||
6,780,747 | + | +0.1 | |||
6,780,748 | - | +0.4 | |||
6,780,748 | - | -0.1 | |||
6,780,748 | - | +0.6 | |||
6,780,763 | - | -1.4 | |||
6,780,771 | + | -0.1 | |||
6,780,771 | + | -0.4 | |||
6,780,772 | - | -1.6 | |||
6,780,772 | - | -0.2 | |||
6,780,772 | - | +0.1 | |||
6,780,772 | - | +0.2 | |||
6,780,995 | - | AO356_29160 | 0.61 | -1.2 | |
6,780,995 | - | AO356_29160 | 0.61 | -1.4 | |
6,781,318 | - | AO356_29165 | 0.18 | -0.3 | |
6,781,605 | + | AO356_29165 | 0.49 | +0.6 | |
6,781,606 | - | AO356_29165 | 0.49 | -0.5 | |
6,781,643 | - | AO356_29165 | 0.53 | +0.1 | |
6,782,105 | + | +0.5 | |||
6,782,110 | - | -1.4 |
Or see this region's nucleotide sequence