Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_16710 and AO356_16715 are separated by 311 nucleotides AO356_16715 and AO356_16720 are separated by 186 nucleotides
AO356_16710: AO356_16710 - cysteine biosynthesis protein CysZ, at 3,769,100 to 3,769,855
_16710
AO356_16715: AO356_16715 - thioredoxin reductase, at 3,770,167 to 3,771,129
_16715
AO356_16720: AO356_16720 - 4-aminobutyrate aminotransferase, at 3,771,316 to 3,772,566
_16720
Position (kb)
3770
3771
3772 Strain fitness (log2 ratio)
-2
-1
0
1 at 3769.218 kb on + strand, within AO356_16710 at 3769.219 kb on - strand, within AO356_16710 at 3769.320 kb on + strand, within AO356_16710 at 3769.321 kb on - strand, within AO356_16710 at 3769.321 kb on - strand, within AO356_16710 at 3769.321 kb on - strand, within AO356_16710 at 3769.431 kb on + strand, within AO356_16710 at 3769.597 kb on + strand, within AO356_16710 at 3769.597 kb on + strand, within AO356_16710 at 3769.597 kb on + strand, within AO356_16710 at 3769.598 kb on - strand, within AO356_16710 at 3769.647 kb on + strand, within AO356_16710 at 3769.647 kb on + strand, within AO356_16710 at 3769.647 kb on + strand, within AO356_16710 at 3769.647 kb on + strand, within AO356_16710 at 3769.647 kb on + strand, within AO356_16710 at 3769.647 kb on + strand, within AO356_16710 at 3769.647 kb on + strand, within AO356_16710 at 3769.647 kb on + strand, within AO356_16710 at 3769.647 kb on + strand, within AO356_16710 at 3769.648 kb on - strand, within AO356_16710 at 3769.648 kb on - strand, within AO356_16710 at 3769.648 kb on - strand, within AO356_16710 at 3769.648 kb on - strand, within AO356_16710 at 3769.648 kb on - strand, within AO356_16710 at 3769.648 kb on - strand, within AO356_16710 at 3769.648 kb on - strand, within AO356_16710 at 3769.648 kb on - strand, within AO356_16710 at 3769.648 kb on - strand, within AO356_16710 at 3769.648 kb on - strand, within AO356_16710 at 3769.648 kb on - strand, within AO356_16710 at 3769.648 kb on - strand, within AO356_16710 at 3769.725 kb on + strand, within AO356_16710 at 3769.725 kb on + strand, within AO356_16710 at 3769.726 kb on - strand, within AO356_16710 at 3769.726 kb on - strand, within AO356_16710 at 3769.772 kb on + strand, within AO356_16710 at 3769.772 kb on + strand, within AO356_16710 at 3769.773 kb on - strand, within AO356_16710 at 3769.773 kb on - strand, within AO356_16710 at 3769.825 kb on - strand at 3769.855 kb on + strand at 3769.855 kb on + strand at 3769.855 kb on + strand at 3769.855 kb on + strand at 3769.855 kb on + strand at 3769.855 kb on + strand at 3769.856 kb on - strand at 3769.856 kb on - strand at 3769.856 kb on - strand at 3769.931 kb on + strand at 3769.931 kb on + strand at 3769.931 kb on + strand at 3769.932 kb on - strand at 3769.932 kb on - strand at 3769.932 kb on - strand at 3769.932 kb on - strand at 3769.932 kb on - strand at 3769.932 kb on - strand at 3769.932 kb on - strand at 3769.959 kb on + strand at 3769.959 kb on + strand at 3769.960 kb on - strand at 3769.960 kb on - strand at 3769.962 kb on + strand at 3769.963 kb on - strand at 3769.980 kb on + strand at 3769.981 kb on - strand at 3769.991 kb on + strand at 3771.169 kb on - strand at 3771.179 kb on + strand at 3771.180 kb on - strand at 3771.180 kb on - strand at 3771.228 kb on + strand at 3771.228 kb on + strand at 3771.228 kb on + strand at 3771.228 kb on + strand at 3771.229 kb on - strand at 3771.557 kb on + strand, within AO356_16720 at 3771.557 kb on + strand, within AO356_16720 at 3771.557 kb on + strand, within AO356_16720 at 3771.558 kb on - strand, within AO356_16720 at 3771.558 kb on - strand, within AO356_16720 at 3771.565 kb on + strand, within AO356_16720 at 3771.701 kb on + strand, within AO356_16720 at 3771.701 kb on + strand, within AO356_16720 at 3771.702 kb on - strand, within AO356_16720 at 3771.702 kb on - strand, within AO356_16720 at 3772.095 kb on - strand, within AO356_16720 at 3772.095 kb on - strand, within AO356_16720 at 3772.095 kb on - strand, within AO356_16720 at 3772.095 kb on - strand, within AO356_16720 at 3772.095 kb on - strand, within AO356_16720 at 3772.095 kb on - strand, within AO356_16720
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 3,769,218 + AO356_16710 0.16 +0.1 3,769,219 - AO356_16710 0.16 -0.7 3,769,320 + AO356_16710 0.29 +0.4 3,769,321 - AO356_16710 0.29 -0.5 3,769,321 - AO356_16710 0.29 +1.4 3,769,321 - AO356_16710 0.29 -0.9 3,769,431 + AO356_16710 0.44 +0.1 3,769,597 + AO356_16710 0.66 +1.0 3,769,597 + AO356_16710 0.66 +0.9 3,769,597 + AO356_16710 0.66 -1.3 3,769,598 - AO356_16710 0.66 +1.1 3,769,647 + AO356_16710 0.72 -0.6 3,769,647 + AO356_16710 0.72 -0.2 3,769,647 + AO356_16710 0.72 +0.6 3,769,647 + AO356_16710 0.72 -0.3 3,769,647 + AO356_16710 0.72 +0.0 3,769,647 + AO356_16710 0.72 -0.5 3,769,647 + AO356_16710 0.72 +0.0 3,769,647 + AO356_16710 0.72 +0.1 3,769,647 + AO356_16710 0.72 -0.6 3,769,648 - AO356_16710 0.72 +0.7 3,769,648 - AO356_16710 0.72 +0.7 3,769,648 - AO356_16710 0.72 -1.6 3,769,648 - AO356_16710 0.72 +0.5 3,769,648 - AO356_16710 0.72 -0.1 3,769,648 - AO356_16710 0.72 -0.1 3,769,648 - AO356_16710 0.72 -0.4 3,769,648 - AO356_16710 0.72 -0.1 3,769,648 - AO356_16710 0.72 +0.2 3,769,648 - AO356_16710 0.72 -0.8 3,769,648 - AO356_16710 0.72 -0.3 3,769,648 - AO356_16710 0.72 +1.3 3,769,725 + AO356_16710 0.83 -0.3 3,769,725 + AO356_16710 0.83 -0.7 3,769,726 - AO356_16710 0.83 -1.0 3,769,726 - AO356_16710 0.83 +0.0 3,769,772 + AO356_16710 0.89 -0.2 3,769,772 + AO356_16710 0.89 -0.1 3,769,773 - AO356_16710 0.89 -0.3 3,769,773 - AO356_16710 0.89 +0.6 3,769,825 - +0.5 3,769,855 + +0.3 3,769,855 + -0.4 3,769,855 + -0.0 3,769,855 + -0.3 3,769,855 + +0.0 3,769,855 + -2.4 3,769,856 - -0.8 3,769,856 - -0.2 3,769,856 - -0.3 3,769,931 + -0.2 3,769,931 + +0.3 3,769,931 + +0.9 3,769,932 - +0.5 3,769,932 - -1.4 3,769,932 - +0.2 3,769,932 - -0.4 3,769,932 - -0.1 3,769,932 - -0.0 3,769,932 - +0.7 3,769,959 + +0.2 3,769,959 + +0.5 3,769,960 - -0.8 3,769,960 - +0.4 3,769,962 + +0.8 3,769,963 - +0.8 3,769,980 + -0.3 3,769,981 - -0.1 3,769,991 + +1.7 3,771,169 - +0.2 3,771,179 + -0.1 3,771,180 - -1.3 3,771,180 - -0.2 3,771,228 + -0.1 3,771,228 + +0.0 3,771,228 + +0.7 3,771,228 + +0.3 3,771,229 - -0.5 3,771,557 + AO356_16720 0.19 -1.6 3,771,557 + AO356_16720 0.19 +1.5 3,771,557 + AO356_16720 0.19 +0.9 3,771,558 - AO356_16720 0.19 +0.4 3,771,558 - AO356_16720 0.19 +0.4 3,771,565 + AO356_16720 0.20 -0.2 3,771,701 + AO356_16720 0.31 +0.7 3,771,701 + AO356_16720 0.31 +0.1 3,771,702 - AO356_16720 0.31 +0.6 3,771,702 - AO356_16720 0.31 +1.4 3,772,095 - AO356_16720 0.62 +0.1 3,772,095 - AO356_16720 0.62 -0.3 3,772,095 - AO356_16720 0.62 +0.2 3,772,095 - AO356_16720 0.62 -0.6 3,772,095 - AO356_16720 0.62 +0.9 3,772,095 - AO356_16720 0.62 +1.2
Or see this region's nucleotide sequence