Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_08090 and AO356_08095 are separated by 101 nucleotides AO356_08095 and AO356_08100 overlap by 4 nucleotides AO356_08100 and AO356_08105 are separated by 268 nucleotides
AO356_08090: AO356_08090 - acetyl-CoA acetyltransferase, at 1,812,032 to 1,813,309
_08090
AO356_08095: AO356_08095 - transposase, at 1,813,411 to 1,814,247
_08095
AO356_08100: AO356_08100 - transposase, at 1,814,244 to 1,814,546
_08100
AO356_08105: AO356_08105 - 3-ketoacyl-ACP reductase, at 1,814,815 to 1,816,167
_08105
Position (kb)
1814
1815 Strain fitness (log2 ratio)
-1
0
1 at 1813.298 kb on + strand at 1813.298 kb on + strand at 1813.298 kb on + strand at 1813.298 kb on + strand at 1813.298 kb on + strand at 1813.298 kb on + strand at 1813.298 kb on + strand at 1813.299 kb on - strand at 1813.324 kb on + strand at 1813.324 kb on + strand at 1813.324 kb on + strand at 1813.324 kb on + strand at 1813.324 kb on + strand at 1813.325 kb on - strand at 1813.325 kb on - strand at 1813.325 kb on - strand at 1813.338 kb on + strand at 1813.338 kb on + strand at 1813.405 kb on - strand at 1814.607 kb on + strand at 1814.654 kb on + strand at 1814.655 kb on - strand at 1814.736 kb on + strand at 1814.736 kb on + strand at 1814.737 kb on - strand at 1814.737 kb on - strand at 1814.737 kb on - strand at 1814.743 kb on + strand at 1814.743 kb on + strand at 1814.743 kb on + strand at 1814.827 kb on + strand at 1814.827 kb on + strand at 1814.827 kb on + strand at 1814.829 kb on + strand at 1814.830 kb on - strand at 1814.830 kb on - strand at 1814.830 kb on - strand at 1815.019 kb on + strand, within AO356_08105 at 1815.020 kb on - strand, within AO356_08105 at 1815.020 kb on - strand, within AO356_08105 at 1815.020 kb on - strand, within AO356_08105 at 1815.310 kb on + strand, within AO356_08105 at 1815.310 kb on + strand, within AO356_08105 at 1815.310 kb on + strand, within AO356_08105 at 1815.310 kb on + strand, within AO356_08105 at 1815.311 kb on - strand, within AO356_08105 at 1815.311 kb on - strand, within AO356_08105 at 1815.311 kb on - strand, within AO356_08105 at 1815.311 kb on - strand, within AO356_08105 at 1815.311 kb on - strand, within AO356_08105 at 1815.311 kb on - strand, within AO356_08105
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,813,298 + -0.5 1,813,298 + +1.5 1,813,298 + +0.2 1,813,298 + +1.2 1,813,298 + +0.5 1,813,298 + -0.3 1,813,298 + +0.7 1,813,299 - +0.5 1,813,324 + +0.3 1,813,324 + +0.0 1,813,324 + -0.6 1,813,324 + -0.1 1,813,324 + -0.2 1,813,325 - -0.1 1,813,325 - -0.1 1,813,325 - -0.1 1,813,338 + +0.3 1,813,338 + -0.0 1,813,405 - -1.4 1,814,607 + +0.9 1,814,654 + -0.4 1,814,655 - +0.9 1,814,736 + +0.1 1,814,736 + +0.3 1,814,737 - +0.2 1,814,737 - +0.7 1,814,737 - -0.8 1,814,743 + -0.1 1,814,743 + -0.8 1,814,743 + -0.8 1,814,827 + +1.0 1,814,827 + +0.0 1,814,827 + +0.8 1,814,829 + +0.4 1,814,830 - +0.1 1,814,830 - -0.1 1,814,830 - -0.5 1,815,019 + AO356_08105 0.15 +0.9 1,815,020 - AO356_08105 0.15 -0.3 1,815,020 - AO356_08105 0.15 +0.2 1,815,020 - AO356_08105 0.15 -0.0 1,815,310 + AO356_08105 0.37 +0.0 1,815,310 + AO356_08105 0.37 +0.1 1,815,310 + AO356_08105 0.37 +0.4 1,815,310 + AO356_08105 0.37 +0.4 1,815,311 - AO356_08105 0.37 -0.1 1,815,311 - AO356_08105 0.37 +0.6 1,815,311 - AO356_08105 0.37 -0.1 1,815,311 - AO356_08105 0.37 +0.1 1,815,311 - AO356_08105 0.37 +0.5 1,815,311 - AO356_08105 0.37 -1.5
Or see this region's nucleotide sequence