Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_01925 and AO356_01930 are separated by 15 nucleotides AO356_01930 and AO356_01935 overlap by 10 nucleotides
AO356_01925: AO356_01925 - hypothetical protein, at 427,543 to 427,905
_01925
AO356_01930: AO356_01930 - hypothetical protein, at 427,921 to 428,799
_01930
AO356_01935: AO356_01935 - biotin synthase, at 428,790 to 430,010
_01935
Position (kb) 427
428
429 Strain fitness (log2 ratio) -2
-1
0
1
2 at 426.934 kb on + strand at 426.939 kb on + strand at 426.939 kb on + strand at 426.955 kb on + strand at 426.955 kb on + strand at 427.013 kb on + strand at 427.029 kb on + strand at 427.029 kb on + strand at 427.029 kb on + strand at 427.029 kb on + strand at 427.029 kb on + strand at 427.030 kb on - strand at 427.030 kb on - strand at 427.030 kb on - strand at 427.030 kb on - strand at 427.030 kb on - strand at 427.030 kb on - strand at 427.030 kb on - strand at 427.030 kb on - strand at 427.159 kb on + strand at 427.159 kb on + strand at 427.159 kb on + strand at 427.183 kb on + strand at 427.184 kb on - strand at 427.245 kb on - strand at 427.251 kb on - strand at 427.286 kb on + strand at 427.286 kb on + strand at 427.286 kb on + strand at 427.286 kb on + strand at 427.287 kb on - strand at 427.287 kb on - strand at 427.309 kb on + strand at 427.414 kb on - strand at 427.442 kb on + strand at 427.442 kb on + strand at 427.443 kb on - strand at 427.443 kb on - strand at 427.443 kb on - strand at 427.456 kb on + strand at 427.456 kb on + strand at 427.456 kb on + strand at 427.456 kb on + strand at 427.456 kb on + strand at 427.456 kb on + strand at 427.456 kb on + strand at 427.456 kb on + strand at 427.456 kb on + strand at 427.456 kb on + strand at 427.456 kb on + strand at 427.457 kb on - strand at 427.457 kb on - strand at 427.457 kb on - strand at 427.457 kb on - strand at 427.457 kb on - strand at 427.457 kb on - strand at 427.457 kb on - strand at 427.457 kb on - strand at 427.457 kb on - strand at 427.462 kb on + strand at 427.463 kb on - strand at 427.463 kb on - strand at 427.488 kb on + strand at 427.502 kb on + strand at 427.502 kb on + strand at 427.520 kb on + strand at 427.556 kb on - strand at 427.674 kb on + strand, within AO356_01925 at 427.703 kb on + strand, within AO356_01925 at 427.721 kb on + strand, within AO356_01925 at 427.721 kb on + strand, within AO356_01925 at 427.777 kb on - strand, within AO356_01925 at 427.783 kb on + strand, within AO356_01925 at 427.783 kb on + strand, within AO356_01925 at 427.783 kb on + strand, within AO356_01925 at 427.783 kb on + strand, within AO356_01925 at 427.795 kb on - strand, within AO356_01925 at 427.901 kb on + strand at 427.902 kb on - strand at 427.922 kb on + strand at 427.922 kb on + strand at 427.922 kb on + strand at 427.922 kb on + strand at 427.946 kb on - strand at 427.975 kb on - strand at 428.156 kb on + strand, within AO356_01930 at 428.156 kb on + strand, within AO356_01930 at 428.156 kb on + strand, within AO356_01930 at 428.156 kb on + strand, within AO356_01930 at 428.156 kb on + strand, within AO356_01930 at 428.156 kb on + strand, within AO356_01930 at 428.156 kb on + strand, within AO356_01930 at 428.156 kb on + strand, within AO356_01930 at 428.159 kb on + strand, within AO356_01930 at 428.160 kb on - strand, within AO356_01930 at 428.160 kb on - strand, within AO356_01930 at 428.160 kb on - strand, within AO356_01930 at 428.160 kb on - strand, within AO356_01930 at 428.160 kb on - strand, within AO356_01930 at 428.549 kb on + strand, within AO356_01930 at 428.549 kb on + strand, within AO356_01930 at 428.549 kb on + strand, within AO356_01930 at 428.550 kb on - strand, within AO356_01930 at 428.550 kb on - strand, within AO356_01930 at 428.550 kb on - strand, within AO356_01930 at 428.947 kb on + strand, within AO356_01935 at 428.993 kb on + strand, within AO356_01935 at 428.994 kb on - strand, within AO356_01935 at 429.014 kb on + strand, within AO356_01935 at 429.149 kb on - strand, within AO356_01935 at 429.182 kb on - strand, within AO356_01935 at 429.262 kb on + strand, within AO356_01935 at 429.262 kb on + strand, within AO356_01935 at 429.265 kb on + strand, within AO356_01935 at 429.265 kb on + strand, within AO356_01935 at 429.265 kb on + strand, within AO356_01935 at 429.266 kb on - strand, within AO356_01935 at 429.266 kb on - strand, within AO356_01935 at 429.322 kb on + strand, within AO356_01935 at 429.556 kb on - strand, within AO356_01935 at 429.590 kb on + strand, within AO356_01935 at 429.592 kb on + strand, within AO356_01935 at 429.592 kb on + strand, within AO356_01935 at 429.593 kb on - strand, within AO356_01935 at 429.593 kb on - strand, within AO356_01935 at 429.593 kb on - strand, within AO356_01935 at 429.593 kb on - strand, within AO356_01935 at 429.593 kb on - strand, within AO356_01935 at 429.593 kb on - strand, within AO356_01935 at 429.593 kb on - strand, within AO356_01935 at 429.637 kb on - strand, within AO356_01935 at 429.656 kb on - strand, within AO356_01935 at 429.656 kb on - strand, within AO356_01935 at 429.796 kb on + strand, within AO356_01935 at 429.796 kb on + strand, within AO356_01935 at 429.796 kb on + strand, within AO356_01935
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 426,934 + +1.1 426,939 + -0.6 426,939 + +0.6 426,955 + -0.9 426,955 + +0.4 427,013 + +0.2 427,029 + -0.1 427,029 + -0.1 427,029 + +1.6 427,029 + -0.2 427,029 + +0.7 427,030 - -0.4 427,030 - -0.6 427,030 - +0.0 427,030 - -0.2 427,030 - +0.1 427,030 - +0.9 427,030 - -0.4 427,030 - +0.1 427,159 + +0.0 427,159 + -0.4 427,159 + -0.1 427,183 + +0.2 427,184 - -0.2 427,245 - +1.8 427,251 - -0.4 427,286 + -0.3 427,286 + -0.0 427,286 + +1.2 427,286 + -0.6 427,287 - +0.7 427,287 - -1.0 427,309 + +0.6 427,414 - +0.2 427,442 + +0.2 427,442 + -0.0 427,443 - -1.0 427,443 - -1.2 427,443 - -0.0 427,456 + +0.9 427,456 + +0.1 427,456 + -0.2 427,456 + -0.3 427,456 + +0.1 427,456 + +0.4 427,456 + -0.1 427,456 + +0.8 427,456 + -2.0 427,456 + +0.2 427,456 + +0.3 427,457 - +0.7 427,457 - -0.1 427,457 - +0.4 427,457 - +0.2 427,457 - -0.5 427,457 - +0.4 427,457 - -0.2 427,457 - +0.2 427,457 - +0.4 427,462 + -0.0 427,463 - +1.2 427,463 - -0.4 427,488 + +0.9 427,502 + +0.2 427,502 + +0.4 427,520 + +0.2 427,556 - +0.4 427,674 + AO356_01925 0.36 -0.2 427,703 + AO356_01925 0.44 -0.4 427,721 + AO356_01925 0.49 +0.0 427,721 + AO356_01925 0.49 -0.2 427,777 - AO356_01925 0.64 -0.4 427,783 + AO356_01925 0.66 -1.6 427,783 + AO356_01925 0.66 +1.6 427,783 + AO356_01925 0.66 -0.6 427,783 + AO356_01925 0.66 +0.1 427,795 - AO356_01925 0.69 -0.4 427,901 + +0.4 427,902 - +0.2 427,922 + +0.1 427,922 + -0.2 427,922 + +0.5 427,922 + +0.1 427,946 - +1.5 427,975 - +0.7 428,156 + AO356_01930 0.27 -0.0 428,156 + AO356_01930 0.27 +0.8 428,156 + AO356_01930 0.27 +0.2 428,156 + AO356_01930 0.27 -0.2 428,156 + AO356_01930 0.27 -0.6 428,156 + AO356_01930 0.27 +1.6 428,156 + AO356_01930 0.27 -0.2 428,156 + AO356_01930 0.27 +1.4 428,159 + AO356_01930 0.27 +0.5 428,160 - AO356_01930 0.27 +0.7 428,160 - AO356_01930 0.27 +0.8 428,160 - AO356_01930 0.27 +0.9 428,160 - AO356_01930 0.27 +0.2 428,160 - AO356_01930 0.27 +0.4 428,549 + AO356_01930 0.71 -0.4 428,549 + AO356_01930 0.71 -0.3 428,549 + AO356_01930 0.71 +0.7 428,550 - AO356_01930 0.72 +0.5 428,550 - AO356_01930 0.72 +0.1 428,550 - AO356_01930 0.72 +0.4 428,947 + AO356_01935 0.13 -0.6 428,993 + AO356_01935 0.17 +0.9 428,994 - AO356_01935 0.17 +0.1 429,014 + AO356_01935 0.18 +0.4 429,149 - AO356_01935 0.29 +0.2 429,182 - AO356_01935 0.32 -0.3 429,262 + AO356_01935 0.39 +0.3 429,262 + AO356_01935 0.39 +0.9 429,265 + AO356_01935 0.39 -0.4 429,265 + AO356_01935 0.39 -0.0 429,265 + AO356_01935 0.39 +0.4 429,266 - AO356_01935 0.39 +0.4 429,266 - AO356_01935 0.39 +0.1 429,322 + AO356_01935 0.44 -0.5 429,556 - AO356_01935 0.63 -0.6 429,590 + AO356_01935 0.66 +1.4 429,592 + AO356_01935 0.66 +0.7 429,592 + AO356_01935 0.66 -0.9 429,593 - AO356_01935 0.66 -0.4 429,593 - AO356_01935 0.66 -0.5 429,593 - AO356_01935 0.66 -0.1 429,593 - AO356_01935 0.66 +0.1 429,593 - AO356_01935 0.66 -0.9 429,593 - AO356_01935 0.66 +0.4 429,593 - AO356_01935 0.66 -0.1 429,637 - AO356_01935 0.69 +1.2 429,656 - AO356_01935 0.71 +0.2 429,656 - AO356_01935 0.71 -0.7 429,796 + AO356_01935 0.82 +0.4 429,796 + AO356_01935 0.82 -1.1 429,796 + AO356_01935 0.82 +0.1
Or see this region's nucleotide sequence