Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_3020
Experiment: MoYLS4 with 2-Furfuraldehyde 0.0625 %
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with 2-Furfuraldehyde 0.0625 % |
---|---|---|---|---|---|
remove | |||||
3,809,701 | - | DvMF_3019 | 0.58 | -0.5 | |
3,809,729 | + | DvMF_3019 | 0.61 | -0.3 | |
3,809,847 | + | DvMF_3019 | 0.71 | +0.0 | |
3,809,847 | + | DvMF_3019 | 0.71 | -2.7 | |
3,810,000 | + | DvMF_3019 | 0.85 | -0.1 | |
3,810,051 | + | DvMF_3019 | 0.90 | -1.5 | |
3,810,263 | + | -0.5 | |||
3,810,268 | + | -0.3 | |||
3,810,293 | - | +1.3 | |||
3,810,537 | + | +0.9 | |||
3,810,544 | - | +0.4 | |||
3,810,566 | - | -3.5 | |||
3,810,566 | - | +0.3 | |||
3,810,673 | - | +0.8 | |||
3,810,673 | - | +1.0 | |||
3,810,825 | - | DvMF_3020 | 0.17 | +0.6 | |
3,810,827 | - | DvMF_3020 | 0.18 | +1.1 | |
3,810,860 | + | DvMF_3020 | 0.20 | +0.9 | |
3,810,964 | + | DvMF_3020 | 0.27 | +0.9 | |
3,811,163 | - | DvMF_3020 | 0.40 | +0.9 | |
3,811,258 | - | DvMF_3020 | 0.46 | +0.8 | |
3,811,461 | + | DvMF_3020 | 0.60 | +1.2 | |
3,811,493 | + | DvMF_3020 | 0.62 | +0.7 | |
3,811,501 | - | DvMF_3020 | 0.62 | +1.2 | |
3,811,705 | + | DvMF_3020 | 0.76 | +0.9 | |
3,811,981 | + | +1.0 | |||
3,812,092 | - | -1.2 | |||
3,812,097 | - | +0.2 | |||
3,812,189 | + | -0.2 | |||
3,812,285 | + | +0.6 | |||
3,812,641 | - | DvMF_3021 | 0.10 | +1.3 | |
3,813,037 | + | DvMF_3021 | 0.31 | +0.3 |
Or see this region's nucleotide sequence