Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_3015
Experiment: MoYLS4 with 2-Furfuraldehyde 0.0625 %
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with 2-Furfuraldehyde 0.0625 % |
|---|---|---|---|---|---|
| remove | |||||
| 3,803,163 | - | -0.4 | |||
| 3,803,423 | + | DvMF_3014 | 0.42 | -1.5 | |
| 3,803,493 | - | DvMF_3014 | 0.52 | -1.7 | |
| 3,803,817 | + | -0.6 | |||
| 3,804,023 | + | -1.2 | |||
| 3,804,107 | + | -0.2 | |||
| 3,804,362 | + | DvMF_3015 | 0.22 | -1.9 | |
| 3,804,688 | + | DvMF_3015 | 0.48 | -2.3 | |
| 3,804,779 | - | DvMF_3015 | 0.55 | -2.0 | |
| 3,804,892 | - | DvMF_3015 | 0.64 | -2.1 | |
| 3,804,914 | + | DvMF_3015 | 0.66 | +1.9 | |
| 3,805,256 | + | -2.0 | |||
| 3,805,490 | - | DvMF_3016 | 0.13 | -2.2 | |
| 3,805,694 | - | DvMF_3016 | 0.32 | +0.0 | |
| 3,805,737 | - | DvMF_3016 | 0.35 | +0.5 | |
| 3,805,804 | - | DvMF_3016 | 0.41 | -0.6 | |
| 3,805,857 | - | DvMF_3016 | 0.46 | -0.2 | |
| 3,805,870 | + | DvMF_3016 | 0.47 | -0.6 | |
| 3,805,892 | + | DvMF_3016 | 0.49 | -1.7 | |
| 3,805,942 | - | DvMF_3016 | 0.54 | -1.5 | |
| 3,806,139 | - | DvMF_3016 | 0.71 | -0.5 | |
| 3,806,258 | - | DvMF_3016 | 0.82 | +0.3 | |
| 3,806,304 | + | DvMF_3016 | 0.86 | -1.2 | |
| 3,806,312 | - | DvMF_3016 | 0.87 | -1.5 | |
| 3,806,312 | - | DvMF_3016 | 0.87 | +0.0 | |
| 3,806,335 | + | DvMF_3016 | 0.89 | -1.7 | |
| 3,806,343 | - | DvMF_3016 | 0.89 | -1.1 |
Or see this region's nucleotide sequence