Experiment: MoYLS4 with 2-Furfuraldehyde 0.0625 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2953 and DvMF_2954 overlap by 1 nucleotides DvMF_2954 and DvMF_2955 overlap by 4 nucleotides DvMF_2955 and DvMF_2956 are separated by 13 nucleotides
DvMF_2953: DvMF_2953 - protein of unknown function DUF214 (RefSeq), at 3,725,138 to 3,726,358
_2953
DvMF_2954: DvMF_2954 - protein of unknown function DUF214 (RefSeq), at 3,726,358 to 3,727,689
_2954
DvMF_2955: DvMF_2955 - ABC transporter related (RefSeq), at 3,727,686 to 3,728,438
_2955
DvMF_2956: DvMF_2956 - efflux transporter, RND family, MFP subunit (RefSeq), at 3,728,452 to 3,729,744
_2956
Position (kb)
3726
3727
3728 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3725.525 kb on - strand, within DvMF_2953 at 3725.883 kb on + strand, within DvMF_2953 at 3726.110 kb on + strand, within DvMF_2953 at 3726.117 kb on - strand, within DvMF_2953 at 3726.127 kb on + strand, within DvMF_2953 at 3726.248 kb on + strand at 3726.265 kb on + strand at 3726.452 kb on + strand at 3726.618 kb on - strand, within DvMF_2954 at 3726.736 kb on - strand, within DvMF_2954 at 3726.850 kb on + strand, within DvMF_2954 at 3727.100 kb on + strand, within DvMF_2954 at 3727.266 kb on - strand, within DvMF_2954 at 3727.341 kb on + strand, within DvMF_2954 at 3727.341 kb on + strand, within DvMF_2954 at 3727.341 kb on + strand, within DvMF_2954 at 3727.341 kb on + strand, within DvMF_2954 at 3727.341 kb on + strand, within DvMF_2954 at 3727.347 kb on + strand, within DvMF_2954 at 3727.349 kb on - strand, within DvMF_2954 at 3727.562 kb on - strand at 3727.594 kb on + strand at 3727.940 kb on - strand, within DvMF_2955 at 3727.975 kb on - strand, within DvMF_2955 at 3728.153 kb on + strand, within DvMF_2955 at 3728.234 kb on - strand, within DvMF_2955 at 3728.639 kb on - strand, within DvMF_2956
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with 2-Furfuraldehyde 0.0625 % remove 3,725,525 - DvMF_2953 0.32 -1.4 3,725,883 + DvMF_2953 0.61 +0.2 3,726,110 + DvMF_2953 0.80 -1.1 3,726,117 - DvMF_2953 0.80 -1.4 3,726,127 + DvMF_2953 0.81 -0.6 3,726,248 + -0.7 3,726,265 + -1.1 3,726,452 + -2.6 3,726,618 - DvMF_2954 0.20 -1.2 3,726,736 - DvMF_2954 0.28 -1.4 3,726,850 + DvMF_2954 0.37 -1.8 3,727,100 + DvMF_2954 0.56 -1.1 3,727,266 - DvMF_2954 0.68 -4.1 3,727,341 + DvMF_2954 0.74 -1.1 3,727,341 + DvMF_2954 0.74 -1.2 3,727,341 + DvMF_2954 0.74 -0.8 3,727,341 + DvMF_2954 0.74 -1.4 3,727,341 + DvMF_2954 0.74 -1.4 3,727,347 + DvMF_2954 0.74 -2.1 3,727,349 - DvMF_2954 0.74 -2.6 3,727,562 - -1.1 3,727,594 + -0.7 3,727,940 - DvMF_2955 0.34 -0.7 3,727,975 - DvMF_2955 0.38 -1.4 3,728,153 + DvMF_2955 0.62 -2.7 3,728,234 - DvMF_2955 0.73 -0.8 3,728,639 - DvMF_2956 0.14 -2.5
Or see this region's nucleotide sequence