Experiment: MoYLS4 with 2-Furfuraldehyde 0.0625 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2943 and DvMF_2944 are separated by 153 nucleotides DvMF_2944 and DvMF_2945 are separated by 151 nucleotides DvMF_2945 and DvMF_2946 are separated by 145 nucleotides
DvMF_2943: DvMF_2943 - hypothetical protein (RefSeq), at 3,714,966 to 3,715,706
_2943
DvMF_2944: DvMF_2944 - hypothetical protein (RefSeq), at 3,715,860 to 3,716,942
_2944
DvMF_2945: DvMF_2945 - Cupin 2 conserved barrel domain protein (RefSeq), at 3,717,094 to 3,717,591
_2945
DvMF_2946: DvMF_2946 - hypothetical protein (RefSeq), at 3,717,737 to 3,718,792
_2946
Position (kb)
3715
3716
3717 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3715.009 kb on + strand at 3715.014 kb on + strand at 3715.226 kb on - strand, within DvMF_2943 at 3715.258 kb on - strand, within DvMF_2943 at 3715.260 kb on + strand, within DvMF_2943 at 3715.268 kb on - strand, within DvMF_2943 at 3715.268 kb on - strand, within DvMF_2943 at 3715.853 kb on + strand at 3715.914 kb on - strand at 3715.945 kb on + strand at 3715.960 kb on + strand at 3715.974 kb on + strand, within DvMF_2944 at 3716.300 kb on + strand, within DvMF_2944 at 3716.528 kb on + strand, within DvMF_2944 at 3716.617 kb on + strand, within DvMF_2944 at 3716.618 kb on + strand, within DvMF_2944 at 3716.618 kb on + strand, within DvMF_2944 at 3716.675 kb on + strand, within DvMF_2944 at 3716.745 kb on + strand, within DvMF_2944 at 3716.824 kb on - strand, within DvMF_2944 at 3716.839 kb on - strand at 3717.074 kb on - strand at 3717.106 kb on + strand at 3717.357 kb on + strand, within DvMF_2945 at 3717.357 kb on + strand, within DvMF_2945 at 3717.417 kb on - strand, within DvMF_2945 at 3717.424 kb on + strand, within DvMF_2945 at 3717.458 kb on + strand, within DvMF_2945 at 3717.603 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with 2-Furfuraldehyde 0.0625 % remove 3,715,009 + +0.5 3,715,014 + -0.1 3,715,226 - DvMF_2943 0.35 -0.1 3,715,258 - DvMF_2943 0.39 -1.1 3,715,260 + DvMF_2943 0.40 +0.3 3,715,268 - DvMF_2943 0.41 +0.8 3,715,268 - DvMF_2943 0.41 -0.7 3,715,853 + -0.4 3,715,914 - +0.0 3,715,945 + -0.4 3,715,960 + -2.0 3,715,974 + DvMF_2944 0.11 -0.9 3,716,300 + DvMF_2944 0.41 -2.0 3,716,528 + DvMF_2944 0.62 -0.9 3,716,617 + DvMF_2944 0.70 -1.9 3,716,618 + DvMF_2944 0.70 -0.6 3,716,618 + DvMF_2944 0.70 -0.4 3,716,675 + DvMF_2944 0.75 -2.3 3,716,745 + DvMF_2944 0.82 -1.4 3,716,824 - DvMF_2944 0.89 -0.5 3,716,839 - -2.5 3,717,074 - -4.5 3,717,106 + -2.9 3,717,357 + DvMF_2945 0.53 +0.8 3,717,357 + DvMF_2945 0.53 -1.6 3,717,417 - DvMF_2945 0.65 -2.7 3,717,424 + DvMF_2945 0.66 -0.3 3,717,458 + DvMF_2945 0.73 -1.0 3,717,603 + -1.1
Or see this region's nucleotide sequence