Experiment: MoYLS4 with 2-Furfuraldehyde 0.0625 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2643 and DvMF_2644 are separated by 800 nucleotides DvMF_2644 and DvMF_2645 are separated by 110 nucleotides
DvMF_2643: DvMF_2643 - response regulator receiver modulated CheW protein (RefSeq), at 3,343,209 to 3,344,381
_2643
DvMF_2644: DvMF_2644 - putative two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq), at 3,345,182 to 3,347,155
_2644
DvMF_2645: DvMF_2645 - peptidase U32 (RefSeq), at 3,347,266 to 3,348,558
_2645
Position (kb)
3345
3346
3347
3348 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 3344.248 kb on - strand, within DvMF_2643 at 3344.344 kb on + strand at 3344.461 kb on - strand at 3344.626 kb on - strand at 3345.458 kb on - strand, within DvMF_2644 at 3345.678 kb on + strand, within DvMF_2644 at 3345.693 kb on + strand, within DvMF_2644 at 3345.712 kb on + strand, within DvMF_2644 at 3345.901 kb on + strand, within DvMF_2644 at 3346.072 kb on - strand, within DvMF_2644 at 3346.283 kb on - strand, within DvMF_2644 at 3346.382 kb on - strand, within DvMF_2644 at 3346.466 kb on - strand, within DvMF_2644 at 3346.748 kb on - strand, within DvMF_2644 at 3346.838 kb on - strand, within DvMF_2644 at 3346.854 kb on + strand, within DvMF_2644 at 3346.902 kb on - strand, within DvMF_2644 at 3347.081 kb on + strand at 3347.311 kb on + strand at 3347.317 kb on - strand at 3347.432 kb on - strand, within DvMF_2645 at 3347.516 kb on - strand, within DvMF_2645 at 3347.924 kb on - strand, within DvMF_2645 at 3348.026 kb on + strand, within DvMF_2645 at 3348.098 kb on + strand, within DvMF_2645
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with 2-Furfuraldehyde 0.0625 % remove 3,344,248 - DvMF_2643 0.89 +0.5 3,344,344 + -0.3 3,344,461 - -0.4 3,344,626 - -0.9 3,345,458 - DvMF_2644 0.14 -0.8 3,345,678 + DvMF_2644 0.25 -3.5 3,345,693 + DvMF_2644 0.26 -2.6 3,345,712 + DvMF_2644 0.27 -1.9 3,345,901 + DvMF_2644 0.36 -4.8 3,346,072 - DvMF_2644 0.45 -2.2 3,346,283 - DvMF_2644 0.56 -2.1 3,346,382 - DvMF_2644 0.61 -2.5 3,346,466 - DvMF_2644 0.65 -1.6 3,346,748 - DvMF_2644 0.79 -2.5 3,346,838 - DvMF_2644 0.84 -2.3 3,346,854 + DvMF_2644 0.85 -3.1 3,346,902 - DvMF_2644 0.87 -1.7 3,347,081 + +0.3 3,347,311 + -0.0 3,347,317 - -1.2 3,347,432 - DvMF_2645 0.13 -0.4 3,347,516 - DvMF_2645 0.19 -0.1 3,347,924 - DvMF_2645 0.51 -0.6 3,348,026 + DvMF_2645 0.59 -0.4 3,348,098 + DvMF_2645 0.64 -3.4
Or see this region's nucleotide sequence